Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmar10_1404 |
Symbol | |
ID | 4284636 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Maricaulis maris MCS10 |
Kingdom | Bacteria |
Replicon accession | NC_008347 |
Strand | - |
Start bp | 1539658 |
End bp | 1541595 |
Gene Length | 1938 bp |
Protein Length | 645 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 638140886 |
Product | hypothetical protein |
Protein accession | YP_756634 |
Protein GI | 114569954 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.15542 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.00031437 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCTTTCCA ATTTTCGTGC TTTCGCCCAG TCGCCCATAG CGCTGATCAT CATTGTCCTG CTGGTATTGT CTTTCGCGAT TGCCATGCCG GGCGCCGGCG GCATCTTCAC CGGCAGCGGT GATGCAGTGG TCGTGGTTGG CCCCGAACGG ATCAGCCAGC GGGAAATGGC GACAGCCTTC AATCGCGAGG TTGCCCGCCT GCAAGAGCAG AACCCGGACG TGACCCGCGA AATGGCGCGC GAGGAAGGGA TCGCCTACCA GGTCCTGCAA CAGCAGATCA CCATGGCAAC CATGGCCGCC CGGGCCCGGG ATCTGGGCCT GGCCATATCC GATGTCGCCA TCGTCAGCGA AGTTGCCGAC GTCCCGGCCT TCCAGAATCC GATCACGGAA CGCTTCGATC GTGACACCAT GGCGGCCGCG CTGCAGCGCT CGGGCGTGAC CGAAGACCAA TTCGCCCGTG ATATCGAAGG TGACCTGTTG CGGTCGCAAT TGATGGCCAC CCTGGCCGGC TTCAGCGATG TCCCCGACCA GATCGCCGCG ACCCGCTATC TCGTTGCCGA GGAACAGCGC CGGATGACCG GCCTCGTGAT CGACGCCTCG ACCGCCGACG AGATCGAGGA CCCGACGGAT GAGACCCTGC AAACCTTCAT TGACGAGACC CTCGGCGCCA ATGGCGAGCC GGTCTTCACT CGCCCGGAAT ACCGCGCCAT CACGCTCGTG CGTTTCCAGC TCGATGACTT CATCCGCGAT GTCGCTGTTG ATGAAGCGAC CCTGCGGGAG GTCTATGACT ATGAAATTGC GACCAACCAG ATCGGGACGC CCGCCTATCG CAGCTTCACC CAGCTGACCG TCAGTGATCA GGCGGGTGCC GATGACGCAG CCAGCCGTCT CGCCGCGGGC GAAGCCCCGT CTGCCGTTGC CGCCGAGCTG GGCCTCGACA CGCCGCTGGT CCAGACCGAT GTCCAGCAAT TCGAGATCCC CGACGAGGGT CTTGGTGAAA CCGTATTTGC CATGTCGGCC GGTGAGGCCC GCGCGGTTGA GGGACGTTTT GGCTGGAGCG CCGTGATTAT TACTGGCGCC GAAGAGGCGA CCCAGCCTGC ATTTGAGGAA GAGCGTCCGC GGCTGCAGGC CGATGCGGCC CGGGCCCAGG CGACGGACGA CATGTATGAT GCCATCTCGG CGTTCGAAAC CGTTCGCGCA ACCGGTGCTT CGCTCGAGGT CGCTGCCGAG GAATCCGGTA CGCCGCTGGA AATCTTCCAG CCTCTCGCCG TGAATTCGAT CGACGAGGAC CTGCAATTTG ATGGCGAACG CTACCAGGCA CTCGCCCCTG AAATCCTGCC GGCGGCCTTC GATCACATCG AGGGATTCGC CACCAATCTG GAAAGCTATA ACGAGACCGA TTTCTACACG CTTCGCGTCG ACGAGATCAT CCAGAGCCGT CCGTTCGAAC TGGAAGAAAT CCGTGAACAG GCCGAGAGCC GCTGGCGCTC GATCCAGGTC GACACCCAAT TGCAGGCTCG TGCCGAGGAT GCGCTGGCCC AGCTTGAAGC CGGTTCCGAC ATGGAAATCG TCAGCCTGAT GGTTGGTGGG CGCACGGAAA CCTCGACCCT GAAACGCGGT CAGACGGCGG GTGGCTTTGA TCGCAATGCG GTTGCCCTCG CCTTCACGAC GGACCCTGGC GCCTACGAAA TGATTCAGGT GGGCGAAGGC CAATACCTGG TTCTCACCGT CAACGAGATC ATCCCGGCCG ACATCGCCGC GGCCCCCGCC GCCGACCTTG CTGGGATCGA AACCAGCCTG ACCACCGAGC TGGGCAATGA CATCGTTTCG GCGACCCGGG AATACCTGAT CCGCGATTAC GGTATCACGG ACGAGTCGAT CGACAATCGC CTGTATTCGC TCGCCATTGG TGAGACCGAT CCCAGCACAC GGCAATGA
|
Protein sequence | MLSNFRAFAQ SPIALIIIVL LVLSFAIAMP GAGGIFTGSG DAVVVVGPER ISQREMATAF NREVARLQEQ NPDVTREMAR EEGIAYQVLQ QQITMATMAA RARDLGLAIS DVAIVSEVAD VPAFQNPITE RFDRDTMAAA LQRSGVTEDQ FARDIEGDLL RSQLMATLAG FSDVPDQIAA TRYLVAEEQR RMTGLVIDAS TADEIEDPTD ETLQTFIDET LGANGEPVFT RPEYRAITLV RFQLDDFIRD VAVDEATLRE VYDYEIATNQ IGTPAYRSFT QLTVSDQAGA DDAASRLAAG EAPSAVAAEL GLDTPLVQTD VQQFEIPDEG LGETVFAMSA GEARAVEGRF GWSAVIITGA EEATQPAFEE ERPRLQADAA RAQATDDMYD AISAFETVRA TGASLEVAAE ESGTPLEIFQ PLAVNSIDED LQFDGERYQA LAPEILPAAF DHIEGFATNL ESYNETDFYT LRVDEIIQSR PFELEEIREQ AESRWRSIQV DTQLQARAED ALAQLEAGSD MEIVSLMVGG RTETSTLKRG QTAGGFDRNA VALAFTTDPG AYEMIQVGEG QYLVLTVNEI IPADIAAAPA ADLAGIETSL TTELGNDIVS ATREYLIRDY GITDESIDNR LYSLAIGETD PSTRQ
|
| |