| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_1282 |
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| Symbol | |
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| ID | 4284008 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Maricaulis maris MCS10 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008347 |
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| Strand | - |
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| Start bp | 1394329 |
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| End bp | 1396932 |
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| Gene Length | 2604 bp |
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| Protein Length | 867 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638140761 |
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| Product | DNA topoisomerase I |
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| Protein accession | YP_756512 |
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| Protein GI | 114569832 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.390974 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.233625 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGTTG TCGTCGTAGA ATCCCCGGCC AAAGCCAAAA CCATCAACAA GTATCTCGGT
GCGGACTACA CGGTTCTGGC GAGTTTCGGC CATGTCCGTG ACCTGCCCGC CAAGGATGGG
TCCGTCAAAC CGGACGAAGA CTTCGAGATG GCCTGGGAAA TCGATACCGC CTCCGCCAAG
CGCGTGAAGG CGATTGCCGA CGCGGTGCGC GAGTCGGACC GACTGATCCT CGCGACTGAC
CCGGATCGCG AAGGTGAAGC CATTTCCTGG CACTTGCTGG AAGCGCTGCA AAAGCGCCGC
GTCCTGAAAG ACGTGACGGT CCAGCGCGTG GCCTTCAACG CCATCACCAA ACCGGCCATC
CTGGAAGCCA TGGCCCATCC GCGGGCCGTC GACATGGAGC TGGTCAACGC CTATCTGGCC
CGCCGTGCGC TCGACTATCT GGTCGGATTC ACCCTGTCGC CGGTGCTGTG GCGCAAATTG
CCGGGATCTC GCTCGGCCGG ACGGGTCCAG TCCGTTGCCT TGCGCCTGAT CTGCGATCGC
GAGCTGGAAA TCGAGAAGTT CCGCTCCGAG GAATACTGGA CCGTGGATGC CGACCTGACG
GCCAACTCGG ATTCCTTCCG GGCCAAGCTG GTCACCCTGG GCGGCAAGAA GCTGCAGAAA
CTGTCGATCA AGGACCGCGC CAGCGCCAAT GCGGCGGTCG AGGCGGTCAA CAGTGCCAAC
CTGTCTATCA CCGGGGTCGA GGCCAAGCCG GCCAAGCGCA ATCCGCCGCC GCCCTTCACC
ACATCGACGC TGCAGCAGGA AGCCGCGCGG AAGCTGGGCT TTTCGGCCAC GCGCACCATG
CAAACCGCGC AGAAACTCTA TGAGGGTGTC ACGCTGGGCG GTGAGACCAC CGGCCTGATC
ACATATATGC GGACCGATGG CGTCACCATG GTGCCCGAAG CGGTCAGCCA GGCCCGCGAT
GTGATCGGCA AGGAGCACGG CTCACTCTAC GTGCCATCAG CGCCACGCCA CTACGCCTCC
AAGGCCAAGA ACGCCCAGGA AGCGCACGAA GCAATCCGCC CGACCAGCTT CTCGCGCCTG
CCTGAAAAGC TGTCGCTGGA TGCCGACATG GCGCGACTCT ACCAGCTGAT CTGGCGCCGG
GCTGTTGCCA GCCAGATGGA AAGCGCCCGC TTCGAGCGGA CCACGGTGGA TATCGCCAGC
CCGGACGGCC AAACGGCCCT GCGTGCTGTG GGCACGGTCC AGCTCTTCGA TGGCTTCCTG
GCGCTCTATC AGGAAGGCCG TGATGATGAA GAGGATGAGG GCGAGAACCG CCTGCCCAAG
CTGACCCAGG GCGCAGCGGC CACGGTCGCC AAGACCCATG CCGACCAGCA CTTCACCCAG
CCACCGCCTC GCTTCACCGA AGCCTCGCTG GTCAAGCGCA TGGAAGAGCT GGGCATTGGT
CGCCCCTCGA CCTACGCCTC GACCCTTCAG GTGCTGCGCG ACCGCGAATA TGTGCAGATG
GAAAAGAACC GCTTCCATCC GTTCGACAAG GGCCGGGTGG TTATCGCCTT CCTGGAAAAC
TTCTTCGCCC GCTATGTCGA GTATGATTTC ACGGCCTCGC TCGAAACGCA GCTCGACAAG
GTCTCGGCCG GAGAGCTCGA CTGGAAGCAG TTGCTGCGCG ACTTCTGGAC CGATTTCCGA
GCCGCCATCG ACGAGATCGG CGAGCTGCGC ATCACCAATG TGCTCGATGC CCTCAACGAG
GCCCTGGCGC CGCATATCTT CCCGGAAAAG GAGGACGGTA CCGATCCCCG CCTTTGTCCT
TCGTGCAAGG AAGGCACGCT GAGCCTGCGT CTGGGCAAGT TCGGCGCTTT CCTGGGCTGC
TCGAACCATC CGGACTGCTC CTTCACGCGC CAGATGAGCC CTCCCGGTGA GGATGATGCC
CAGGGCGATC GCGTGATCGT CCAGCATCCG GAAACCGGCA AGGATGTCGA ACTGAAGAAT
GGCCGCTTTG GCTGGTATCT CCAGATGCAG CTGGATGGGG AAGATAAGCC GAAACGCTCT
TCCATCCCCA AGGGCTGGGA CGCGGCGACC CTGACCGAGG AACAGGCGAT CAAGCTGATC
GACCTGCCGC GGACGGTTGG CGAGCATCCC GATGACGGCC AGCCGATCAC GGCCAATATC
GGCCGCTACG GTCCCTATGT TCACCACGAC AAGACCTACG CCAACATCCC CTCGGTCGAG
GAAGTCTTCG AGATCGGCCT CAACCGCGCG GTCTCGGTGA TCGCCGACAA ACGGGCCAAT
GGCGGACGCC GGGGTGCGAC GGCCTCTGCT CTCAAGGAAC TGGGCGAGCA CGACGGCAAG
CCGGTCCGGA TCATGTCGGG ACGTTATGGT CCCTATGTGA AGTACGAGAA GATCAACGCC
ACCCTGCCCA AGGATACCGA TCCGGAAAGC GTGACCCTGG AACAGGCCAT GGAATGGGTC
GAGGCGAAGG CTGCCAAGGG CGGCAAGAAG AAAGCCCCGG CCAAGAAAAA GGCCCCTGCC
AAGAAGAAGG CGCCGGCGAA GAAGGCGACC GCCAAGAAGC CCGCTGCCAA GAAAACGGCC
GCCGCCAAAG ACAAGGCGGA ATAG
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| Protein sequence | MNVVVVESPA KAKTINKYLG ADYTVLASFG HVRDLPAKDG SVKPDEDFEM AWEIDTASAK
RVKAIADAVR ESDRLILATD PDREGEAISW HLLEALQKRR VLKDVTVQRV AFNAITKPAI
LEAMAHPRAV DMELVNAYLA RRALDYLVGF TLSPVLWRKL PGSRSAGRVQ SVALRLICDR
ELEIEKFRSE EYWTVDADLT ANSDSFRAKL VTLGGKKLQK LSIKDRASAN AAVEAVNSAN
LSITGVEAKP AKRNPPPPFT TSTLQQEAAR KLGFSATRTM QTAQKLYEGV TLGGETTGLI
TYMRTDGVTM VPEAVSQARD VIGKEHGSLY VPSAPRHYAS KAKNAQEAHE AIRPTSFSRL
PEKLSLDADM ARLYQLIWRR AVASQMESAR FERTTVDIAS PDGQTALRAV GTVQLFDGFL
ALYQEGRDDE EDEGENRLPK LTQGAAATVA KTHADQHFTQ PPPRFTEASL VKRMEELGIG
RPSTYASTLQ VLRDREYVQM EKNRFHPFDK GRVVIAFLEN FFARYVEYDF TASLETQLDK
VSAGELDWKQ LLRDFWTDFR AAIDEIGELR ITNVLDALNE ALAPHIFPEK EDGTDPRLCP
SCKEGTLSLR LGKFGAFLGC SNHPDCSFTR QMSPPGEDDA QGDRVIVQHP ETGKDVELKN
GRFGWYLQMQ LDGEDKPKRS SIPKGWDAAT LTEEQAIKLI DLPRTVGEHP DDGQPITANI
GRYGPYVHHD KTYANIPSVE EVFEIGLNRA VSVIADKRAN GGRRGATASA LKELGEHDGK
PVRIMSGRYG PYVKYEKINA TLPKDTDPES VTLEQAMEWV EAKAAKGGKK KAPAKKKAPA
KKKAPAKKAT AKKPAAKKTA AAKDKAE
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