| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_1258 |
|---|
| Symbol | aspS |
|---|
| ID | 4283799 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Maricaulis maris MCS10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008347 |
|---|
| Strand | + |
|---|
| Start bp | 1370811 |
|---|
| End bp | 1372628 |
|---|
| Gene Length | 1818 bp |
|---|
| Protein Length | 605 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 638140737 |
|---|
| Product | aspartyl-tRNA synthetase |
|---|
| Protein accession | YP_756488 |
|---|
| Protein GI | 114569808 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0173] Aspartyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.000886805 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCACGCAT ACCGCTCCCA TACCTGCGCC GAGCTGCGCA AGGCTCATGT TGGCCAGACG
GCCCGGATTT CCGGCTGGAT CCACCGCAAG CGCGATCATG GCGGTCTGCT CTTCATCGAC
CTGCGCGACC ATTACGGTCT GACCCAGGTC GTTCTGGAGC CGGAAAGCCC GCATTTCGCG
ACGCTGGAAC GCTTGCGTGT TGAAAGCGTG ATCACTGTGA CCGGTGAGGT CATCGCCCGC
TCCGACGAGA CCGTGAACGC CAACCTGCCG ACCGGCGAGA TCGAGGTCCG CCTGGCCGAG
CTGGCAATCC AGTCGGAAGC CGAAGAGCTG CCGCTGCCGG TCTTTGGTGA GCCGGACTGG
TCGGAAGAAG TTCGCCTCAA GCACCGCTAT ATCGATCTGC GCCGGGAAAG CCTGCACAAG
CGCATCGTGC TGCGCTCGAA GATCATCGAC AGCCTGCGCC GCCGCATGGT CGACGAGAAT
TTCGTCGAAT ATCAGACGCC GATCCTGACC GCGTCATCGC CGGAAGGGGC GCGTGACTTC
CTGGTGCCGA GCCGGGTCCA TCCGGGCAAG TTCTACGCCC TGCCGCAGGC GCCGCAGCAG
TTCAAACAGC TGATCATGGT CTCCGGCTTT GACCGCTATT TCCAGATCGC ACCGTGTTTC
CGCGATGAAG ACGCCCGGGC CGACCGCGCA CCGGGCGAAT TCTACCAGCT CGACATGGAA
ATGAGCTTTG CTACCCAGCA GGACGTGTTC GACGTGATCG AGCCGGTCAT GAAGGGCCTG
TTCGACGAGT TCGCCGACGG TCGCACCGTG CCGGACGAGC CTTTCGTCCA GATCGCCTAC
AAGGACGCGA TGAGCTGGTA TGGGTCCGAC AAGCCGGATC TGCGCAACCC GATCAAGATG
TCCGATGCCT CCGAGACCTT CCGCGGGTCC GGCTTCAAGG TGTTTGCCGG CATGCTCGAG
CGCAATCCCA AGGTCCAGGT CTGGGCTATC CCGGCCAAGA CCGGCGGCAG CCGGGCTTTT
TGTGACCGCA TGAATTCCTG GGCCCAGAAA GAGGGCCAGC CGGGCATGGG TTATATCTTC
TGGCGTGAGG CCGAAGGCGG CCTGGAAGCG GCCGGTCCGA TCGCCAAGAA TATCGGCGAG
GAGCGGACCG AGGCGCTGCG CGTCGAACTG GGTCTGGAAG CCGGCGATGC CTGCTTCTTT
GCGGCGGGTG ATCCGCGCGA GTTCGCCGGT TTTGCCGGTC GGGCCCGCGA TGTGGTCGGC
GCTGAGCTCG ACCTGTGCGA GAAAGACACT TTCCGCTTCT GCTGGATTGT CGATTTCCCG
ATGTATGAGT GGGATGAGGA CAACAAGAAG ATCGACTTCT CGCACAACCC GTTCTCGATG
CCGCAGATCG ATCCGGACGA TTTCCTCAAG CTCGACGCCG ATACCGATGC CGACACGCTG
CTGGCGCTGA AAGCCTATCA GTACGACATC GTCTGCAATG GTGTGGAATT GTCCTCCGGC
GCCGTGCGGA ACCATCGTCC GGACGTGATG CTGAAAGCCT TTGCCTTTGC CGGCTATGAC
GCGGCGACGG TGGAAGAGGA ATTCGGCGGC ATGCTCAACG CCTTCCGCTA TGGTGCCCCG
CCGCACGCCG GTGTCGCGCC GGGTGTTGAC CGCATGATCA TGCTGCTGGC CGGTGTCGAG
AACCTGCGCG AAGTCGTGAT GTTCCCGAAA GACCAGCAGG CTCGTGACCT GATGATGAAT
GCGCCGGCCG AAGTCGAGCT CAAGCAATTG CGTGAGCTGC ACATTCGCAC GGTCGTGCCG
GATGCCAAGA AGGGCTGA
|
|---|
| Protein sequence | MHAYRSHTCA ELRKAHVGQT ARISGWIHRK RDHGGLLFID LRDHYGLTQV VLEPESPHFA
TLERLRVESV ITVTGEVIAR SDETVNANLP TGEIEVRLAE LAIQSEAEEL PLPVFGEPDW
SEEVRLKHRY IDLRRESLHK RIVLRSKIID SLRRRMVDEN FVEYQTPILT ASSPEGARDF
LVPSRVHPGK FYALPQAPQQ FKQLIMVSGF DRYFQIAPCF RDEDARADRA PGEFYQLDME
MSFATQQDVF DVIEPVMKGL FDEFADGRTV PDEPFVQIAY KDAMSWYGSD KPDLRNPIKM
SDASETFRGS GFKVFAGMLE RNPKVQVWAI PAKTGGSRAF CDRMNSWAQK EGQPGMGYIF
WREAEGGLEA AGPIAKNIGE ERTEALRVEL GLEAGDACFF AAGDPREFAG FAGRARDVVG
AELDLCEKDT FRFCWIVDFP MYEWDEDNKK IDFSHNPFSM PQIDPDDFLK LDADTDADTL
LALKAYQYDI VCNGVELSSG AVRNHRPDVM LKAFAFAGYD AATVEEEFGG MLNAFRYGAP
PHAGVAPGVD RMIMLLAGVE NLREVVMFPK DQQARDLMMN APAEVELKQL RELHIRTVVP
DAKKG
|
|---|
| |