Gene Mmar10_1252 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmar10_1252 
Symbol 
ID4283793 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMaricaulis maris MCS10 
KingdomBacteria 
Replicon accessionNC_008347 
Strand
Start bp1363858 
End bp1365018 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content66% 
IMG OID638140731 
Productribonuclease D 
Protein accessionYP_756482 
Protein GI114569802 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0349] Ribonuclease D 
TIGRFAM ID[TIGR01388] ribonuclease D 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value4.81962e-05 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACAATGA TTACCACGAC CGAGGCCCTC GAAGCGGCCT GCGACGCCCT CCTGCAGCAT 
CCCTATGTCG CTGTGGACAC CGAGTTCATG CGCGAGACGG TTTACTGGCC CCAGCTGTGC
CTGATCCAGG CCGCCGCCGG TGAAACCGAG GTCATCATCG ACCCGCTCGC CGAGGGTATC
GATCTGGAAC CCTTTTGGGA GCTGATGGCG GATGAGCGCA TCATCAAGGT CTTCCACGCC
GCCCGCCAGG ATCTGGAAAT CTTCTTCCAT CAGGGTGGCG ACGCGCTGAT CCCGCATCCG
ATGTTCGACA GCCAGGTTGC CGCCATGGCG CTCGGCCTGG GCGACTCGAT CGCCTATGAC
GCGCTGGTCC GGACACTGCT GAACAGGCCG ATTGATAAAG GCCCGCGCTT CACCGACTGG
TCGCGCCGCC CGCTGTCCGA TGCCCAGACC AAATACGCCA TCGCCGATGT CACCCATCTG
CGCGACCTCT ACCCGATGAT GGTCGAGCGG CTGGAAAAGA CCGGCCGCAC CGAATGGCTG
GCCGGCGAGA TGAAAACACT CACCAGCCCG TCGACCTATC GCCTCGACCC GGAGGAAAGC
TGGCGCCGGA TGAAGCTGCG CAAGACGACG ACCAAATGGG TCGCTTCCCT GCGCGCCGCC
GCGGCCTGGC GCGAGACCGA GGCCCAGACC CGCGACATGC CGCGCCAGCG CGTGATGAAG
GATGACGCGA TCTACGAGAT CGCCAATGTC GCCCCGACCG CGCCGGAACA GCTGACCGGC
CTGCGCGCCG TGCCCAAGGG CTTTGAACGC TCCAGCGCCG CCAAACGCCT GTTCGACAAG
ATGAGCGAAG CCCTCGCCGA CGCCGAGGCC TATGCCCCCA AGGTCGAAAA GCCGGCCCCG
CCGCCGCAGG GTGTCGGTCC GACGGTCGAA CTCCTGAAAG TTTTCCTCAA GCTGGTCGCC
GACGAAAAAG ACGTCGCCCC GCGCCTGATC GCCAATGCCG CCGACCTGGA AAAGATCGCC
GCCGACGACA AGGCCGACGT CCAGGCCCTG ACCGGCTGGC GCCGCGAGGT CTTCGGCGAG
CCCGCCCTCA AGCTCAAGCG CGGCGAGATG GCGCTGGCTT TGAAGGACGG CAAGGTCGTC
GTGGTGGACA CGAAGGGCTG A
 
Protein sequence
MTMITTTEAL EAACDALLQH PYVAVDTEFM RETVYWPQLC LIQAAAGETE VIIDPLAEGI 
DLEPFWELMA DERIIKVFHA ARQDLEIFFH QGGDALIPHP MFDSQVAAMA LGLGDSIAYD
ALVRTLLNRP IDKGPRFTDW SRRPLSDAQT KYAIADVTHL RDLYPMMVER LEKTGRTEWL
AGEMKTLTSP STYRLDPEES WRRMKLRKTT TKWVASLRAA AAWRETEAQT RDMPRQRVMK
DDAIYEIANV APTAPEQLTG LRAVPKGFER SSAAKRLFDK MSEALADAEA YAPKVEKPAP
PPQGVGPTVE LLKVFLKLVA DEKDVAPRLI ANAADLEKIA ADDKADVQAL TGWRREVFGE
PALKLKRGEM ALALKDGKVV VVDTKG