| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_1241 |
|---|
| Symbol | |
|---|
| ID | 4286406 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Maricaulis maris MCS10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008347 |
|---|
| Strand | + |
|---|
| Start bp | 1352201 |
|---|
| End bp | 1353439 |
|---|
| Gene Length | 1239 bp |
|---|
| Protein Length | 412 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 638140720 |
|---|
| Product | lysine decarboxylase transcriptional regulator, CadC |
|---|
| Protein accession | YP_756471 |
|---|
| Protein GI | 114569791 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG3710] DNA-binding winged-HTH domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.0151467 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATTACA GCAAGCCATT TCTCCTTGGC GCATGGCGCG TCGAGCCGTC TTCCTGTGAG
GTGACCGGTC CGGAAGGGGT CCGGGAGCTG GAACCCAAGG TGATGGATTT GTTGTGCCTG
CTGGCTGAAG CCAAAGGAGA GGTCGTTTCG CGCGCAACCA TCTCCGCCCG GATATGGCCC
GGTGTCACGG TGAATGAAGA TGCCATGGGG CGTTGTGTCT GGAAGTTGCG CCGTGCCCTT
GGAGACCCGT CGCGCTCGCC GCGTTATGTC GGAACTGTTC CGAAGCGGGG CTACCGACTG
CTCGAGCCGG TGAGCGCGAT ACCGGTCAGC CCGGCGATGA TTGCGCGCCT GGTACCGAAC
TGGATCTGGG GTGTCTGCGG TGCCTTGCTG TTGCTGGCCG CGTTTCCGGC CTATTGGCTG
GCCCGTGACC AGGTCGCTGC CAATTCCGCC CCTGAGGATC GCGCCCTGCA ACTCGTCGAT
CGCGCCGAGG GTTTTTACTA CCAGTTCGAA TATGACGCGA ACGAGGCGGC GATGCGGCTC
TACGAGGCCG CCCTCGAGTT GGAGTCCGAC AATGCCCGGG CCTTGGCCGG GTTGGCCAAT
ACAATAACCC AGCGCGTCAT ACGCGGTACG GTGGATGAAT GGCCGGCCGA GCTCGGTACG
TCGCGCATAG GCAATGCCGT CGCAAACCGG ATCGGCGATC AGGAAGACGC GGCGCGTCGG
CTCGATCGGG CGGAATCTCT GGCTCGACGG GCCATTGCCG CGGATGCGGA CTATCCGCTT
GGCTACCGGG CCCTTGGCCT GTCGCTGTCG GCACAAGGGG CACTGGACGC CGCGGTCGAG
GCTTATAATC AGGCCCTGAC GATAGATCCG GACGCCTGGG AGGCGTGGAT CAACCTGTCC
GACATCCACT CCATTCGCGG TGAGGATGAT CTTGCACTGA CCTATCTGGA ACGCGCCTAT
GACGCGATGG GTCGGGTTTA TGACGACCAG ACTGTGCTGG TGCGCCCGTG GTACAGTCCC
ATGGGTTTGA TGATTGCCCG CGACCATGCC GCGCGATCAG ATCCGGTGAC GGCCGAATTC
TGGTACCGGC GAGTGCTGTA CTGGGATCCC TACAATCGCG AGGCGCTTTC TGAGCTGGCC
GAGCTGCTGC GGGCGAATGG CGATGCGCCT TCTGCTGAGG CATTGTGCGC TGAAGGAATT
GCCCGGATCG GGGATGCAAC CCTGTGTGAC GGACCTTGA
|
|---|
| Protein sequence | MDYSKPFLLG AWRVEPSSCE VTGPEGVREL EPKVMDLLCL LAEAKGEVVS RATISARIWP
GVTVNEDAMG RCVWKLRRAL GDPSRSPRYV GTVPKRGYRL LEPVSAIPVS PAMIARLVPN
WIWGVCGALL LLAAFPAYWL ARDQVAANSA PEDRALQLVD RAEGFYYQFE YDANEAAMRL
YEAALELESD NARALAGLAN TITQRVIRGT VDEWPAELGT SRIGNAVANR IGDQEDAARR
LDRAESLARR AIAADADYPL GYRALGLSLS AQGALDAAVE AYNQALTIDP DAWEAWINLS
DIHSIRGEDD LALTYLERAY DAMGRVYDDQ TVLVRPWYSP MGLMIARDHA ARSDPVTAEF
WYRRVLYWDP YNREALSELA ELLRANGDAP SAEALCAEGI ARIGDATLCD GP
|
|---|
| |