| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_1218 |
|---|
| Symbol | |
|---|
| ID | 4286471 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Maricaulis maris MCS10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008347 |
|---|
| Strand | + |
|---|
| Start bp | 1327519 |
|---|
| End bp | 1328565 |
|---|
| Gene Length | 1047 bp |
|---|
| Protein Length | 348 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 638140698 |
|---|
| Product | aminodeoxychorismate lyase |
|---|
| Protein accession | YP_756449 |
|---|
| Protein GI | 114569769 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1559] Predicted periplasmic solute-binding protein |
|---|
| TIGRFAM ID | [TIGR00247] conserved hypothetical protein, YceG family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 0.319435 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGACG CGCCCGCGCC CAAGGCCAAG GCCAAATCCG GCCTGGTCCG TATCTTCATC
GGATTGATCG TAATCCTGTT TGTCCTCGCC CTGGTGGCGG CCGGCACCGT CTATGGCGGC
TACAAGTGGA TGCAGGCCGA ATTCGCCGCG CCGGGACCGG CGGAAGAGGA AACCATTATT
CTCCTGCCAC GCGGGGCCGG ACTGATCGCC ATCGCCAGCC AGCTGGAAAA CGCCGGCCTG
ATCAGCGATC GCCGCATCTT CCGCGTCGCG GTGACGCTGG ATGGCGGTGA GGGCGTGTTG
CGGGCGGGCG AGTACCGCAT ACCCGCTCAG GCCTCGATGG CGCAGATCTA CGAACAACTC
CGCGTCGGCC AGACGGTGCA ATATCCGGTC ACCTTTGCCG AAGGCCTGAC CAGCGCCATG
ATCGTCGAAA CGCTGAATGC GGCGGACGTG CTGACCGGTG AGATCAGCGA TATTCCCGCC
GAGGGAACGC TGCTGCCCGA GACCTATCTG GTCACCCGTG GCACCGCGCG CCAGGAAGTC
CTTGACCGCA TGGCTGCGGC CCAGACCGAA CTGCTGGACC GCTTGTGGGA GACCCGCGCC
GAAAACCTGC CTGTGACCAG CCGCGAGGAG GCCATTATCC TGGCTTCGGT GGTCGAGAAG
GAGACCGGTG TCGCGTCGGA ACGCCCCGAG GTCGCCGCGG TTTTCGTCAA CCGCCTGCGA
CGCGGCATGC GTCTGGAAAG TGATCCGACC ATCATTTATG GCATCAGCCA GGGCCGCCCC
CTGGGGCGCG GGCTGCGTCG CTCGGAAATC GACAATACCG AGAACGCCTG GAACACCTAC
CAGATCCCGC GCCTGCCACC GACGCCGATC GCCAATCCCG GTGCCGAATC GATTGCCGCC
GTCCTCAATC CGGCCGAGAG CACGGCGCTC TTCTTCGTCG CCGACGGGTC CGGCGGTCAC
GCCTTCGCCG ATACCTATGC CCAGCACCAG CGCAATGTCG CGGTCTGGCG CCGGGTCGAG
CGCCAGCGTC GCAATGGGGG CAATTGA
|
|---|
| Protein sequence | MSDAPAPKAK AKSGLVRIFI GLIVILFVLA LVAAGTVYGG YKWMQAEFAA PGPAEEETII
LLPRGAGLIA IASQLENAGL ISDRRIFRVA VTLDGGEGVL RAGEYRIPAQ ASMAQIYEQL
RVGQTVQYPV TFAEGLTSAM IVETLNAADV LTGEISDIPA EGTLLPETYL VTRGTARQEV
LDRMAAAQTE LLDRLWETRA ENLPVTSREE AIILASVVEK ETGVASERPE VAAVFVNRLR
RGMRLESDPT IIYGISQGRP LGRGLRRSEI DNTENAWNTY QIPRLPPTPI ANPGAESIAA
VLNPAESTAL FFVADGSGGH AFADTYAQHQ RNVAVWRRVE RQRRNGGN
|
|---|
| |