Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmar10_0916 |
Symbol | |
ID | 4285248 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Maricaulis maris MCS10 |
Kingdom | Bacteria |
Replicon accession | NC_008347 |
Strand | - |
Start bp | 1012940 |
End bp | 1014910 |
Gene Length | 1971 bp |
Protein Length | 656 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638140384 |
Product | 1A family penicillin-binding protein |
Protein accession | YP_756147 |
Protein GI | 114569467 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.129187 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTATCAGG AGCCGTTTCG CGCGGATCAC ATGATGGAAC GTGACCGACG CACACGTCGC ACGCGCCTGA TCCTCGGCGG CGTGCTGGGC TCGCTTGTCC TGCTGGGCAC GGTGTTGGGC GTGACCGGCT GGCATTGGGC CTTCCACGAC CTGCCGGCCG CTCCGACTTC GGCCTCCGAA CTGTGGTCGA CCCGGCGCGA ACCCTCGGTG ACGCTGCAGG ATCGCGACGG TCATGTGCTG GCGGTACGGG GCCCCTTATA TGCCCGTGCG GTGGCGCTGG ATGCCCTGCC CGAGCATGTA CCGCAGGCCT TCCTGGCGAT CGAGGACCAG CGCTTTTACG AGCATGACGG CGTCGATCTG CGCGGCGTTT TCCGGGCCTT GTGGGTCAAT TTCCAGGCCG GCCGCTCGGT CCAGGGTGGT TCGACCATCA CCATGCAGCT GGTCAAGAAT CTGATCCTGA CGCCGGACCG GCATCTGCGC CGCAAGATCC AGGAAATGCG GCTGGCGCGG CAGCTGGAAG ACCATCTGAC CAAGACCGAG ATTCTCGAGC TTTATCTCAA CCGCATCTAT CTGGGCGCCC GCGCCTTTGG CGTCGAAGCG GCGGCGCAGC GCTATTTCGA CAAGCCGGCG ACCGAGTTGA CCCTGGCCGA GGCGGCACTT CTGGCGGCCC TGCCCAAGGC ACCCAGCCGG CTTGACCCGA CGGTCAATCT GGCTGCCGCC CAGGCTCGCG CCGCGACCGT GCTCGACGCC ATGCTGGAGG CCGGTTTCAT CGACCAGGCA GCCCATGATG CCGCCATCGC CGAACCGGCC GCACCGGTCG CCGACACCTC CGACCCCAAT GCCACGGCGG TCTGGGGTCA CGCCTTTGAC TATGCCCTCG CCGAAGCCGC CGATCTGGTC GCCGCCGACG TCCCCGATCT GGTCATCCGC ACCACGCTCG ACCCGGCCCT GTCGCGGGCG GCACACGACG TCATCGAGAC TGTGCTGGAC GAAGAGGGCG AGGCCCAGAA TGCCGGCGAG GCCGCGATCA TGCTGCTGGC ACCGGACGGG GCGATCCGGG CCTTTGCCGG GGGCCGCGAC TATGCGACCA GCCAGTTCAA TCGCGCCATC CAGGCCCAGC GCCAGCCCGG CTCGGCCTTC AAGCCCTTCG TCTTCGCCGC AGCGCTGGAG GCGGGCTATG ATCCGTCCTC GGCGGTATGG GACGAGCCGA TCGACCTGGA AGGCTGGACG CCGCAGAATT TCTCCGGCGG GTTTCGCGGT CTGGTGACCC TGCAAGAAGC GCTGAAACGC TCGATCAACA CGGTCGCGGC CCAGGTCGCA GACCAGGTTG GCATTGCCCG TGTGGTCGAG GTCGGACAGC GCTTCGGCAT CCGCTCGCCC TTGCCCGAAC TGCCCGCCAT CGCGCTCGGC GCCGCGGAAG TGAATCTGCT CGAACTGACC TCGGCCTATG CCGTGTTCGG CAATGACGGG GCCCGCCGCG AGCCCTATTT CATCACCTCG ATCACCAATT CACGCGGCGA CATCCTGTTT GAACATGTCG ACACGCCGGC CCAGCGGGCA ACGACGGCCG CGACCGCCCG CTCGATGTCG ACCATGTTGC AGGATGTGGT GCTGAGCGGA ACCGGCCGGC GGGCCGCCCT GCCAGGCCGC GCCTCGGCCG GGAAAACCGG GACCAGCCAG TCCTTCCGCG ATGCCTGGTT CGTTGGCTAT ACGGCCGATT TCACAGCCGG GGTCTGGGTT GGCAATGATG ATGACACACC GATGGACGAC GTCACCGGCG GCGGCCTGCC GGCGATTATC TGGCAACGCT TCATGACCCG GGTGCATCAG GACCTGCCGG TGCGGCCGCT ATCGGCCCCG GCGCCGCGCA CACGCTCGGA ACGGGAAGAG CGGCTGGCCG CCTTCTACTC CGACCTGTCA GCGTCCTTCT CGGTGATACT GGCTGACGGG GCTTCGCCCA CCGAGCGCTG A
|
Protein sequence | MYQEPFRADH MMERDRRTRR TRLILGGVLG SLVLLGTVLG VTGWHWAFHD LPAAPTSASE LWSTRREPSV TLQDRDGHVL AVRGPLYARA VALDALPEHV PQAFLAIEDQ RFYEHDGVDL RGVFRALWVN FQAGRSVQGG STITMQLVKN LILTPDRHLR RKIQEMRLAR QLEDHLTKTE ILELYLNRIY LGARAFGVEA AAQRYFDKPA TELTLAEAAL LAALPKAPSR LDPTVNLAAA QARAATVLDA MLEAGFIDQA AHDAAIAEPA APVADTSDPN ATAVWGHAFD YALAEAADLV AADVPDLVIR TTLDPALSRA AHDVIETVLD EEGEAQNAGE AAIMLLAPDG AIRAFAGGRD YATSQFNRAI QAQRQPGSAF KPFVFAAALE AGYDPSSAVW DEPIDLEGWT PQNFSGGFRG LVTLQEALKR SINTVAAQVA DQVGIARVVE VGQRFGIRSP LPELPAIALG AAEVNLLELT SAYAVFGNDG ARREPYFITS ITNSRGDILF EHVDTPAQRA TTAATARSMS TMLQDVVLSG TGRRAALPGR ASAGKTGTSQ SFRDAWFVGY TADFTAGVWV GNDDDTPMDD VTGGGLPAII WQRFMTRVHQ DLPVRPLSAP APRTRSEREE RLAAFYSDLS ASFSVILADG ASPTER
|
| |