Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmar10_0899 |
Symbol | |
ID | 4284064 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Maricaulis maris MCS10 |
Kingdom | Bacteria |
Replicon accession | NC_008347 |
Strand | + |
Start bp | 990671 |
End bp | 992359 |
Gene Length | 1689 bp |
Protein Length | 562 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638140367 |
Product | periplasmic sensor signal transduction histidine kinase |
Protein accession | YP_756130 |
Protein GI | 114569450 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.000736499 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.0870171 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTCGTCA ACCTGATCTG GCTTGGCACG CTGGCGGCTG CCTTGCCGCG GCTGTGGCCA ATCATTGACG GGACCGCCGT CGAGAAGTCG CTGCTGGTCG CGGCCATCGC CGCGCCGGCC CTGCTTTCCT TCATTCTCGT CCCGCGCATG GACCGCGCCT TCGAGCGTTT CCTGCTGGCG CTGGTCTGGA CCGGCTTTGC GGTCGGCGTG ACCCTGACCG GTGGCGGTGT CACCGGGATC GGCGTGCTGG CCTTCCTGCT GGCCCCGGCC ATGGCGGCCG CCTGCGGTGA GCGCGACGGT GTGATCAAGG CGGCGGCCCA GTCCGGACTG GCCGCCCTTG TCATCAGCGG CCTGCAGCTG ACCGGTTTTG TCGCGCCGGC GCCGATGGCC ATCGAATTCC ATCTGCCCTT CGTACTGGGC TGCGTGCTCA CCCTGTCGAC CGGCTTTGCC TTTGGTGCCC TGCGTGCCGT GCATGATGCC GACCTGGCGC GCGCCGAGGC TGAACGGGGG CGTGTCCGCG CCAAGGCCTT CGACGCCTCA CCCGTACCGC TGGTCGCTTG CGATGCTGAC GGCCATATCC TGGCCGCCTC GCGGGGCTTG CGTGACCTGT CGCCCGGCCT GCCGCGTGAC CTGAAGGGCC TGCCGCTGGC CGATCTCGGT TTCGACGATG ATGACCGCGC CCAGCTGGCC GCCTCTGGCC GCCGTGCCGC GCTGCGCGAT GTCGAGGGAC CACTCGTTGT GCGCGGGCCG CGCGGTCACA GCGAAGACGT GATCGTCAAG ACGCGGCCCA TCCATGGCGG CTCGGTCATC ACCCTGTCCA AGGATAGTGG TCCGGCCCTG CAGGCCGCGC TGACCCAGGC CCGGCACGAC CGCGAGGCCG CCGAAGAGGA CGCCCGCGCC AAGTCGCAAT TCCTGGCCTC CGTCAGTCAC GAGCTGCGCA CCCCGCTCAA TGCCATTATC GGTTTTTCCG ATGTCATGAA GGCGCGCCTG TTCGGGCCGC TGCCGGCGCG CTACGCCGAA TATGCCGACC TGATTCATGA AAGCGGCCAG CACCTGATGG AGCTGATCGG CGACGTGCTG GACATGTCCA AGATCGAGGC CGACCGCTAT GAGCTGGTCC GCGAGACCTT CGATATCGGG GAAGTGGTCA ACCTGTCGGC CAAGATGATG CGCCTGCAGG CAGAAGAGGC CGGCATCAAT CTCAAGATCA AGCGCCATGA CGGCCCGCTT CTGGTCGATG GTGACCGCAA GGCCCTGCGC CAGATCCTGC TGAACCTGCT GTCCAATGCC GTCAAGTTCA CGCCGAAGGG CGGTGCCATC GTGGTCATGG CCCGGGCCAG CGGTGGCCAG CTTGTGATGG CCGTCGGCGA TAGCGGTGTC GGCATCGATC CGGAAGAAAC CGCCCGTCTT GGCCAGCCCT ACCAGCAGGC CGCCAATGCG CGTGACATCG AAAAGCGCGG CACGGGCCTC GGCCTGTCAC TGGTTCGCGC CCTGTCGGAA TTGCATGGCG GCTCGATGAA TATCGCCAGC CGCAAGGGCG AGGGCACCAC GGTGACCATT TCCCTGCCCA TCCTCGCCGA AGACAAGGCC GACGTGGAAC CCCATCCCGG CCTCGACGTC CGCCAGCAGA TCCAGCGGGC CCAGGAAGCC AGCCAGGACA TGACGGTGGT GAAGGCGGAT GTGGCCTAG
|
Protein sequence | MLVNLIWLGT LAAALPRLWP IIDGTAVEKS LLVAAIAAPA LLSFILVPRM DRAFERFLLA LVWTGFAVGV TLTGGGVTGI GVLAFLLAPA MAAACGERDG VIKAAAQSGL AALVISGLQL TGFVAPAPMA IEFHLPFVLG CVLTLSTGFA FGALRAVHDA DLARAEAERG RVRAKAFDAS PVPLVACDAD GHILAASRGL RDLSPGLPRD LKGLPLADLG FDDDDRAQLA ASGRRAALRD VEGPLVVRGP RGHSEDVIVK TRPIHGGSVI TLSKDSGPAL QAALTQARHD REAAEEDARA KSQFLASVSH ELRTPLNAII GFSDVMKARL FGPLPARYAE YADLIHESGQ HLMELIGDVL DMSKIEADRY ELVRETFDIG EVVNLSAKMM RLQAEEAGIN LKIKRHDGPL LVDGDRKALR QILLNLLSNA VKFTPKGGAI VVMARASGGQ LVMAVGDSGV GIDPEETARL GQPYQQAANA RDIEKRGTGL GLSLVRALSE LHGGSMNIAS RKGEGTTVTI SLPILAEDKA DVEPHPGLDV RQQIQRAQEA SQDMTVVKAD VA
|
| |