Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmar10_0618 |
Symbol | |
ID | 4283790 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Maricaulis maris MCS10 |
Kingdom | Bacteria |
Replicon accession | NC_008347 |
Strand | - |
Start bp | 716227 |
End bp | 717345 |
Gene Length | 1119 bp |
Protein Length | 372 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638140083 |
Product | pseudouridine synthase, Rsu |
Protein accession | YP_755849 |
Protein GI | 114569169 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.0879771 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCGGAA CTGCTGACAC GTCAGAACGT ATTGCCAAAT TCCTCGCCCG CGCCGGTGTG GCCTCACGCC GTGAGGTCGA ACGCATGATC GAGGGCGGCC GGGTGAAGGT CGATGGCAAG ACGCTCGACA CGCCGGCCTT CAAGGTCACG GGCAGCGAGC ATATCGAGGT TGACGGCAAG CGCATCGAGC CGCCCGCCGC CACCAAGCTG TGGCGCTATC ACAAGCCCGA CGGCCTGGTC ACCACCCATG CCGACCCGGA AGGCCGCGAG ACCGTATTCG ACGCCATCCC CAAGGATATC GGCCGGGTGA TCTCGATCGG CCGCCTCGAC CTGACCTCGG AAGGCCTGCT GCTGCTGACC AATGATGGCG CCCTCGCCCG CGCCCTGGAA CTGCCCTCGA CCGGCTGGAC ACGCCGCTAC CGCGCCCGCG CTTTCGGTTC GATCTCGGAA AGCGCCCTGA AAATCCTGCG CGCCGGGGTG ACGGTGGAAG GCATCAAGTA CGGGCCGATG GAGGTCGAGG TCGAGCGCGA GACCGGGTCC AATATCTGGC TTGAGGTCGG CATTCGCGAA GGCAAGAACC GCGAAGTCCG CAAGGCGCTC GACGCGGTCG GTCTGCGCGT CAACCGCCTG ATCCGCATCG CCTATGGCCC CTTCCAGCTG GGGCAGCTGG AAAAGGGTGA GATCAAGTCC GTGCCCTCAC GCGTTTTGCA CGACCAGTGC GGCCATCTGA TCGACATGGG CGACACGCCG ACCGGCCAGG CGATCGCCAA GCCGCGTCCC GCCAACCGGG CGGCCCGCAA GCCGGGCCAG AAGCCGGATG GCAAGCCCGG TCAGCGCGCC ATGGGTGGAC CGGGTCAGCC CGGCCTGCCC AAACGCGAGG TCGATGACAG CCTGATCGAA GACGCACGCA AGGGCCGTCC GCTGGATGCC AAATCGACCC GCGCCCGTCG CGGCAAGGAT GGCAAGCCGA CCGCCAAACC GGCTGCCGGT CGCGCCGCGC CGCGCGCGAC CACATCACGG TCTGAGACGC CGCGCCCTGA CACACCGCGC ACCGGCGGCC CCCGCAAGCC GGGTGGGCCG CGCACCGGTG GACCTCGCAA GCCCGGCGGC CGGAGCTAG
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Protein sequence | MTGTADTSER IAKFLARAGV ASRREVERMI EGGRVKVDGK TLDTPAFKVT GSEHIEVDGK RIEPPAATKL WRYHKPDGLV TTHADPEGRE TVFDAIPKDI GRVISIGRLD LTSEGLLLLT NDGALARALE LPSTGWTRRY RARAFGSISE SALKILRAGV TVEGIKYGPM EVEVERETGS NIWLEVGIRE GKNREVRKAL DAVGLRVNRL IRIAYGPFQL GQLEKGEIKS VPSRVLHDQC GHLIDMGDTP TGQAIAKPRP ANRAARKPGQ KPDGKPGQRA MGGPGQPGLP KREVDDSLIE DARKGRPLDA KSTRARRGKD GKPTAKPAAG RAAPRATTSR SETPRPDTPR TGGPRKPGGP RTGGPRKPGG RS
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