Gene Mmar10_0504 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmar10_0504 
Symbol 
ID4286721 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMaricaulis maris MCS10 
KingdomBacteria 
Replicon accessionNC_008347 
Strand
Start bp593312 
End bp594418 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content64% 
IMG OID638139969 
ProductABC-2 type transporter 
Protein accessionYP_755735 
Protein GI114569055 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID[TIGR00025] ABC transporter efflux protein, DrrB family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0820778 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTCCC TGTCCCGCAT CCTTGCCATG CTGGGCAAGG AATTCATCCA GATGCTGCGC 
GACCGGCTGA CCTTCGGCAT GATGGTTGGT ATTCCGGTCA TGCAGCTCCT CCTGTTCGGC
TATGCCATCA ATACCGACCC GCGCCACCTG CCGACCCTGG TCGAGATGGG CGATAGCGGG
CCGGCCAGCC GCGCTATCCT TCAGGCAATG GAGACGTCAG AGTATTTCGA CCTGATCGGC
ACGGTCGCCC CCGGCGCCGA GGTCGAGACG GTGATGCGCG ACGGGCAGGC CGCCTTCATC
GTCACAATCC CGCCGGGCTT CGAGCGGGAA CTGGCGCGCG GCGAAAGACC GCAAATCCTG
CTCGATGCCG ATGCCACGGA CCCGGTTGCT GCCGGTGCCG GAGCCGGCGC CTTTGCGACC
ATCGTGCAGC AGGCGCTGGA ACCGATGCTC GGTGAGATGA CGCCGCCGGT CGAGACCATC
ATCCACCGGC GCTACAATCC GGCCGGTCTT ACCGCCCTCA ATATTGTCCC CGGCCTGCTC
GGCATCATCC TGACCATGAC CATGGCGATG ATGACCTCGA TGGCCCTGAC CCGTGAAGCC
GAACGCGGCA CGCTGGAAGC CCTGCTGTCG ACCCCGACCC GACCGCATGA GGTCATGATC
GGCAAGATCA CCCCCTATGT CGTGGTCGGC TTCATCCAGG TGGCGATCAT GCTGCTGGGC
GCCCGCTTCC TGTTCGGCGT GCCCTTTGAG GGCTCACCCC CGGCCTTCCT GGCCGCCGTC
TCGCTCTTCA TCCTGGTCAA TCTGGCACTG GGCTTTTTGT TCTCGACCGT GGCGCGCAGC
CAGATGCAGG CGATGCAGCT GACCTTCTTC GCCTTCCTGC CCTCTATCCT CCTGTCCGGC
TTCATGTTCC CCTTCGCCGC CATGCCGCAC TGGGCCCAGG CGATCGGCCA GGCCATCCCC
GCGACCCATT TCATCCGCGC CGTCCGCGCC ATCATGCTGA AGGGCGCCGG GTTGGAGCAT
GTCTGGCCCC AGATATGGCC GCTGATGGTG ATCTTCACGG TAATCGCGAC CGTGGCCATG
CTGCGCTATC GGCAGACGCT GGATTAG
 
Protein sequence
MKSLSRILAM LGKEFIQMLR DRLTFGMMVG IPVMQLLLFG YAINTDPRHL PTLVEMGDSG 
PASRAILQAM ETSEYFDLIG TVAPGAEVET VMRDGQAAFI VTIPPGFERE LARGERPQIL
LDADATDPVA AGAGAGAFAT IVQQALEPML GEMTPPVETI IHRRYNPAGL TALNIVPGLL
GIILTMTMAM MTSMALTREA ERGTLEALLS TPTRPHEVMI GKITPYVVVG FIQVAIMLLG
ARFLFGVPFE GSPPAFLAAV SLFILVNLAL GFLFSTVARS QMQAMQLTFF AFLPSILLSG
FMFPFAAMPH WAQAIGQAIP ATHFIRAVRA IMLKGAGLEH VWPQIWPLMV IFTVIATVAM
LRYRQTLD