Gene Mmar10_0467 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmar10_0467 
Symbol 
ID4284156 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMaricaulis maris MCS10 
KingdomBacteria 
Replicon accessionNC_008347 
Strand
Start bp544817 
End bp546136 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content66% 
IMG OID638139931 
Productmajor facilitator transporter 
Protein accessionYP_755698 
Protein GI114569018 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value0.677382 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATACGCA CCACCGACTC CGGGTCCGGA ACCGACAGCT ATCGCAATGT CGCCGCCATC 
GTCATCGCCC TCGCCATCCT GCAGATGGCG ACAGGTGCGC TGTCAGTGGT CGGACCGCTG
ACCCTGGTGT CACAGGGCGC GGCGCCGCTG AAGATTGGTG CAATCGTCTC TTCCTACGCA
CTCGGCTTCA TGCTGGGAGC CCGGCTGGCG CCACGCGAGA TCATGCAGAT CGGCCATATC
CGGGCCATTG CCGGTTTTGC GGCAGCCGCC TCGCTGGGCG CAGCGGCGCT CTATGTCAGC
GGGGCGATGG CCTGGTGGAT GCTGGTCCAG TTCATCATCG GCTTATCCGT GGCCGGTTTT
CTGGCCTCCG GGGAAAGCTG GATTGCCGAT GCCGCACCCA GCCAGAGCCG CGGCGCCATT
CTCGGCTTCT ACCTGGTGAC ATCCAAGCTT GGCTTCATGG CCGGCCCCTT CCTGGTGGCC
GGTGCGCCTG CCGGCACGGC GACGGGCTTC CTGATCGTCG CCGCCCTGCT GACCGCCAGC
CTCATTCCGG TCTGCGCCAC CCGACGGGCC GAACCGGCAG CGCCGACAGC CAAGCCCTTC
AGCCCGTTGA GAATCTGGAA AATTGCCCCG TCAGCCATTA TCGCCGCACT GGTCTCGGGC
ATGGTGTCCG GTGCGGTATT GCAGCTGTAT GCCGTTTTCA TCCAGGACTT CGCCGTCGGC
AGCGTCACCC AGACCGCCGC CTGGTTCAAC GCTGCCATGA TCGGCGGATC GGTCCTCGCC
ACCTGGCCGG CCGGCATGCT GTCGGACCGC ATGGACCGTC GGATGGTGAT CGCAGGCCTG
GCCCTGGTGG CCGGCGCAGC CGCGCTGGTC ATGGCCCTGT TCAGCGGCAT GCTGCCGCGC
ATGGCAATTT TCACCATCGC CGCCATCTGG GGCGCTGGTG CCTTGTCCTA TTACGGAGTC
GCGGTTGCCC ATGCCGCCGA TCGGGCTCCG GAAGGCCAGG CGACCAGCAT GATGTCCGGC
ATCCTGATGG TGTGGGCGCT GGGCTCGATG ATCGGACCGC TCGCTGCCAG TACCGTGATG
AGCTTTATCG GACCGTCCGG ACTGTTCCTG TTTGCCGCGG TCACCCTGTT CAGCCTGACC
GGGTTGATGC TGGTCCGACG CACCGGAACG GCGCCTGTTC GCGACGAGGA CAAGTCTGAC
TTTGAGCCTA CGGCCACCAC TTCCGTTTCG GTCGTCGAGA TGACGGAACG TGCCGAGGAG
GACCAGGAAT GGTCCGAGGC GCCAGAGGCG GAGTTCGAGG ACGCCAGCTG GCGTGACTGA
 
Protein sequence
MIRTTDSGSG TDSYRNVAAI VIALAILQMA TGALSVVGPL TLVSQGAAPL KIGAIVSSYA 
LGFMLGARLA PREIMQIGHI RAIAGFAAAA SLGAAALYVS GAMAWWMLVQ FIIGLSVAGF
LASGESWIAD AAPSQSRGAI LGFYLVTSKL GFMAGPFLVA GAPAGTATGF LIVAALLTAS
LIPVCATRRA EPAAPTAKPF SPLRIWKIAP SAIIAALVSG MVSGAVLQLY AVFIQDFAVG
SVTQTAAWFN AAMIGGSVLA TWPAGMLSDR MDRRMVIAGL ALVAGAAALV MALFSGMLPR
MAIFTIAAIW GAGALSYYGV AVAHAADRAP EGQATSMMSG ILMVWALGSM IGPLAASTVM
SFIGPSGLFL FAAVTLFSLT GLMLVRRTGT APVRDEDKSD FEPTATTSVS VVEMTERAEE
DQEWSEAPEA EFEDASWRD