Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmar10_0455 |
Symbol | |
ID | 4285640 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Maricaulis maris MCS10 |
Kingdom | Bacteria |
Replicon accession | NC_008347 |
Strand | - |
Start bp | 530444 |
End bp | 531166 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638139918 |
Product | pyrimidine 5'-nucleotidase |
Protein accession | YP_755686 |
Protein GI | 114569006 |
COG category | [R] General function prediction only |
COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED [TIGR01993] pyrimidine 5'-nucleotidase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.50243 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGACA ACAACGCCGA CAGCCGCGCC GACATGCGTC ACATCACGCA CTGGGTCTTT GACCTGGACA ACACGCTCTA CCCGTCCGAC GCGCCGATCA TGGCCCAGGT CGACCGGCGC ATGACCCAGT ATGTCGCTCG CCTGCTGGCC CTGCCCGAGG ACGAGGCCCG CACCGTCCAG AAAACCTATT GGCGCGACTA TGGCACGACG CTGAACGGGT TGATGGCCAA TCATGACGTC GATCTGCGCG ACTTCCTCGA CTTCGTCCAC GATGTCGACC CGACCGTGAT CACCCCGCAT CCCGAACTCG CCAATCGGAT CAAGGCCCTG CCTGGCAAGC GTCTGGTCTA CACCAATGGC TCGCTCGGCC ATGCCGAGAA TATTCTCGAT CATATGGGCC TGACACACCT GTTCGACGAC ATCTTCGACG TCGAGGCCTC GGGCTTCCAG CCCAAGCCGC ACCAGGCCGG CTTCGACAGC TTTGTGTCGC GCTTCGCCCT GCCGGTCCCG GAATCGGTCT TCTTCGAGGA CAGTGTCCGC AATCTCAAAA CAGCCCACGA CATGGGCTTC ACAACCGTCC TCGTCCGCGC AAAACATGGA CCGCGCGACG AGGAGAGCGC CGCGCCGGAC GAACATCCCG ACCATGTCCA CCATGCCGTG GACTGCCTGC CCACTTTTCT CGGCTCCCTC CGCACAGCCG CCACACCGGA CGATGAAACA TGA
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Protein sequence | MADNNADSRA DMRHITHWVF DLDNTLYPSD APIMAQVDRR MTQYVARLLA LPEDEARTVQ KTYWRDYGTT LNGLMANHDV DLRDFLDFVH DVDPTVITPH PELANRIKAL PGKRLVYTNG SLGHAENILD HMGLTHLFDD IFDVEASGFQ PKPHQAGFDS FVSRFALPVP ESVFFEDSVR NLKTAHDMGF TTVLVRAKHG PRDEESAAPD EHPDHVHHAV DCLPTFLGSL RTAATPDDET
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