| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_0454 |
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| Symbol | dapD |
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| ID | 4285639 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Maricaulis maris MCS10 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008347 |
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| Strand | - |
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| Start bp | 529620 |
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| End bp | 530447 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638139917 |
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| Product | 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase |
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| Protein accession | YP_755685 |
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| Protein GI | 114569005 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2171] Tetrahydrodipicolinate N-succinyltransferase |
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| TIGRFAM ID | [TIGR00965] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 0.961288 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACA CACATCTCAT CACCACCATC GATACTGCTT GGGACAATCG TGACAGCGTC
TCGACCGACA CGACCGGGGA AGTCCGGGAT GCCGTGGAGA CCGCGATCAA CCTGCTCGAT
AGTGGCAAGG CGCGGGTCGC GTCGCGCGGG GATGACGGCC ATTGGGTGGT GCATCAATGG
CTGAAAAAGG CCGTACTGCT CGGCTTCCGC CTCAATCCGA TGGATTTGAT CGAGGGCGGG
ATTGCCGGTG CGAAATGGTG GGACAAGGTG CCGTCCAAGT TTGAGGGTTG GGGCGAGGCC
GAGTTCAAGG CTGCCGGTTT CCGCGCCGTG CCGCCCTGCG CCGTGCGCCG CGGTGCCTTC
ATCGCGCCGG GCGCTGTGCT GATGCCATCC TATGTCAATC TGGGCGCCTA TGTCGGCGAA
GGCACGATGA TCGACACCTG GGCCAGTGTC GGCTCGTGCG CCCAGGTCGG TGCCAATTGC
CACATCTCGG CCGGGACCGG GATTGGCGGC GTTCTCGAAC CGCTGCAGGC CGATCCGGTG
ATCATCGAGG ATAACTGCTT CATCGGCGCC CGCTCGGAAG TCGTCGAGGG CGTGATCGTG
CGCGAGGGTT CGGTGCTGGC GATGGGGGTC TACATCACCC GCTCGACCAA GATCGTCGAC
CGCGCCAGCG GCGAGATCAG CTATGGCGAA GTGCCGGCAT ACTCGGTCGT CGTGCCCGGC
GCCCTGCCCG ACCCCAAGGG CGGACCGAGC CTTTATTGCG CCGTCATCGT CAAGCGCGTC
GACGCCCAGA CCCGCGCCAA GACCTCGATT AACGACCTGC TGCGCTAG
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| Protein sequence | MTDTHLITTI DTAWDNRDSV STDTTGEVRD AVETAINLLD SGKARVASRG DDGHWVVHQW
LKKAVLLGFR LNPMDLIEGG IAGAKWWDKV PSKFEGWGEA EFKAAGFRAV PPCAVRRGAF
IAPGAVLMPS YVNLGAYVGE GTMIDTWASV GSCAQVGANC HISAGTGIGG VLEPLQADPV
IIEDNCFIGA RSEVVEGVIV REGSVLAMGV YITRSTKIVD RASGEISYGE VPAYSVVVPG
ALPDPKGGPS LYCAVIVKRV DAQTRAKTSI NDLLR
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