Gene Mmar10_0387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmar10_0387 
Symbol 
ID4285539 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMaricaulis maris MCS10 
KingdomBacteria 
Replicon accessionNC_008347 
Strand
Start bp461289 
End bp461951 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content68% 
IMG OID638139850 
Productprepilin-type cleavage/methylation-like protein 
Protein accessionYP_755618 
Protein GI114568938 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4795] Type II secretory pathway, component PulJ 
TIGRFAM ID[TIGR01711] general secretion pathway protein J
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value0.618821 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCCGG TCCAGCCATC CGCACAGGCC GGCTTCTCGC TCACCGAAGT CCTGGTCTCG 
GTCTTCATCT TCGCCATCAT CGGCTCGATC TCGGTCGGGC TGATGGCGTC GAGCCTGTCG
GCGCAGGAAC AGAACTCCGA TGTGCTCGAC CAGGCCGCCA TGCTGGACAC CACCCGCACC
CTGTTGCGTG AGGATTTCGG GCAGGTGGTG CTGCGCCCGG CGCGCGATGC GGAAGGTCGT
ACCCTGACCG CCCTGTTCGC CGGAGATGTG GACGGGGTGG ACCGGAGCGG TTTCGGTGAC
GGCGTGCGTT CCGGCGACAC CATTCTCACC CTCACCCGCC GGGGTCGGTC CAATCCCGGC
TTGCTGCGTC CGCGGTCCAG CCTGGCCCGC GTCGATTATG TGCTGCGCGA CGGCAATCTC
GTGCGCCGGA TGATGCGCCA TGTCGATGGC AGCCAGCCGA TCGATGATGG CGAGATCGTG
CTGGTGGCCG GTGTCAGCGA TGTCGAACTC GATTTCCTGG TCGGCGCGGC GTGGACGCGG
CGGGTGATGC TCAGATCGGG CCAGGGCGAG GCCGGGCTGC CGCGCGCCGT GCGCCTGCGC
TACAACGCGC CGCGCCTGGG CGTCGTTGAA CATGTGGTCC TCACATCGGG GGCAGGCGGA
TGA
 
Protein sequence
MTPVQPSAQA GFSLTEVLVS VFIFAIIGSI SVGLMASSLS AQEQNSDVLD QAAMLDTTRT 
LLREDFGQVV LRPARDAEGR TLTALFAGDV DGVDRSGFGD GVRSGDTILT LTRRGRSNPG
LLRPRSSLAR VDYVLRDGNL VRRMMRHVDG SQPIDDGEIV LVAGVSDVEL DFLVGAAWTR
RVMLRSGQGE AGLPRAVRLR YNAPRLGVVE HVVLTSGAGG