| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_0381 |
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| Symbol | |
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| ID | 4285533 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Maricaulis maris MCS10 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008347 |
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| Strand | + |
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| Start bp | 455235 |
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| End bp | 457187 |
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| Gene Length | 1953 bp |
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| Protein Length | 650 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638139844 |
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| Product | general secretion pathway protein D |
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| Protein accession | YP_755612 |
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| Protein GI | 114568932 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1450] Type II secretory pathway, component PulD |
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| TIGRFAM ID | [TIGR02517] general secretion pathway protein D |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.693227 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.206619 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAGT TTGCGAAAAA CGCCCTGGCC GCCCTGTGTG TGCTGTCTGT CCTCGTGCTG
GCGCCGATGG CCCGCGCCCA GGACCAGGTG GTCAATTTCA ACCAGGCCGA GATCCAGGCG
GTCATCGATG ATGTCTCGGC GGTGACCGGA TACACTTTCA TCGTTGATCC GAATGTACGC
GGTCGGGTGA CCATCACCTC GCAGGCGCCG CTGACCTCGG ACCAGTATTT CCAGGTCTTC
CTGTCGACCA TGCGGGTGCA TGGCTACACC GTGGTGCCGA CCGCGTCGGG GGCCTACCAG
ATCGTCCCGG ACCAGGCCGG CGCCCGCTCC GCCAATCCGG TCAATTCCAA CCTGCGTGGC
GACCAGTATG TGACCGCCGT CGTGCGTCTG AACCATGTCG CCTCGCGCGA TGCGCTCGCC
GTGGTGCGGC CCCTGATCGG TGCCCAGGGC AGCGTCAATG CGACCGAGAC CGGCAATGTG
CTGGTGATGG TCGACTATGC CGAGAACATC GCCCGCCTGC GCCAGGTCAT CCGCGATCTC
GACCGTGACA CCTCGGTGGT GGAAATGGTC GAGCTGACCA ATGTCTCGGC CGGCGACATG
ACACGCATCC TGCAACAGAT GCGGACCAGT TCGACGGCGG GCGAGGACGA GACCATTTTC
AACGTTGCCA TCGCGCCGAT CCCGGCTTCC AACACCGTCC TGCTGCGCGG CAATCGTGAC
GCCGTTGACC GCATGATTGC CCTGGTGCGC CGGGTCGACA GTGTCAGCCA GTCGAACCGG
AGCTTCCGCG TCATCTATCT CAGCCATGCC GATGGCGAGC ATTTGCTGCC GATCCTGCAG
CAGGTGGTCG ACACCCTGGT GGCAGGTGAG GGAACGACGC GCGCCCCGTC AGTCTCGCAC
CATGCCCCCA CCAATGCGCT GGTCATCAAT GCCGATCCGG ACGTGCAGCG CCAGCTCGAA
CTGGTGATCC GCCAGCTCGA CATCCGCCGG CCGCAAGTGC TGGTCGAGGG CATCATTGTC
GAGATGTCCG ACAGCACGGC CCGCGAACTC GGCGTGCAGA TGCTGCTGGC CGGTGGTGAG
GGCGACACGC CTTTGGCAAT GACCCGCTTC TCCTCCAACA ATCCCGACCT GCTGGCCCTG
ACCGGAGCCG CGACCTCGCC CGGCGATGAT GACAGCGATC TCAATGTGTC GCTGCGCGAT
GCGGCGATCA ATTCGCTGCT TGGTGCCTCG GGTGGCACGC TGGGCTTTGG CGGCCAGAAC
GGCAGCGGCA ACCTGTTCGG CCTGGTCCTC AACGCGGTCG AAAGTGACGT CAATTCCAAC
GTTCTGGCCA CGCCCTCCAT CATGGCGCTG GACAATGAGG AAGCCTATTT CCTGTCCGGT
CAGGAAATCC CGGTGACCAC CGGCGAGGCG CTTGGCTCGA ACAACACCAA CCCGTTCCGG
ACGGTTGACC GCGAAGAGGT CGGTGTGAAG CTGACCGTCC TGCCGCAGAT CACCGAGGGC
AATACGGTGC GTCTGCACAT CGTGCAGGAA GTCTCCTCGG TGGCGGGTGC GGTCAATGCC
GGCTCGTCCG ACCTGATCAC CAACAAGCGT GAAATCTCGA CGACGGTGCT GGCCGATAAT
GGCGAGATCA TCGTGCTGGG TGGCCTGATC CAGCAGGAAG ACGAGATCAG CGAGGACGGC
GTGCCGGGCC TGCGTCGCCT GCCCGGCGTC GGTCGCCTGT TCCGCTCGGA GGGCTCCACC
ACCCGCCGCA CCAATCTGAT GGTCTTCATC CGTCCGACCA TCATCCGCTC AGAGGCCGAC
ATGCAGGCCC TGACCGACAA TCGTTATGAC TTCATCCGCA ATGAGCAGAT CGCCGGCAGC
CCGAACGGGA CCAGCTCGCT GGAATCGATT GTCGAGATGA TGCTGGTCGA GATGGATGCG
CCTGTCGCCA CAGCGGAGAC GCCGGGTGAC TGA
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| Protein sequence | MTQFAKNALA ALCVLSVLVL APMARAQDQV VNFNQAEIQA VIDDVSAVTG YTFIVDPNVR
GRVTITSQAP LTSDQYFQVF LSTMRVHGYT VVPTASGAYQ IVPDQAGARS ANPVNSNLRG
DQYVTAVVRL NHVASRDALA VVRPLIGAQG SVNATETGNV LVMVDYAENI ARLRQVIRDL
DRDTSVVEMV ELTNVSAGDM TRILQQMRTS STAGEDETIF NVAIAPIPAS NTVLLRGNRD
AVDRMIALVR RVDSVSQSNR SFRVIYLSHA DGEHLLPILQ QVVDTLVAGE GTTRAPSVSH
HAPTNALVIN ADPDVQRQLE LVIRQLDIRR PQVLVEGIIV EMSDSTAREL GVQMLLAGGE
GDTPLAMTRF SSNNPDLLAL TGAATSPGDD DSDLNVSLRD AAINSLLGAS GGTLGFGGQN
GSGNLFGLVL NAVESDVNSN VLATPSIMAL DNEEAYFLSG QEIPVTTGEA LGSNNTNPFR
TVDREEVGVK LTVLPQITEG NTVRLHIVQE VSSVAGAVNA GSSDLITNKR EISTTVLADN
GEIIVLGGLI QQEDEISEDG VPGLRRLPGV GRLFRSEGST TRRTNLMVFI RPTIIRSEAD
MQALTDNRYD FIRNEQIAGS PNGTSSLESI VEMMLVEMDA PVATAETPGD
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