Gene Mmar10_0293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmar10_0293 
Symbol 
ID4284035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMaricaulis maris MCS10 
KingdomBacteria 
Replicon accessionNC_008347 
Strand
Start bp347026 
End bp348375 
Gene Length1350 bp 
Protein Length449 aa 
Translation table11 
GC content62% 
IMG OID638139756 
ProductRh family protein/ammonium transporter 
Protein accessionYP_755524 
Protein GI114568844 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0004] Ammonia permease 
TIGRFAM ID[TIGR00836] ammonium transporter
[TIGR03644] probable ammonium transporter, marine subtype 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.825675 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.151871 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGGCA GAACACAAAT GAGCAAGACA CTGGCGAGGG GCGCTTTGTG TGCAGTGGTG 
GCCGGTATCG GTTTGACCGG TGCCGCGCAC GCCGAGGTGT CGGAGGAAAC AGCGTTCGTT
TTCAACACGC TGCTTTTCCT GATCGGGGGT TTCCTCGTGA TGTTGATGGC GGCTGGTTTC
GCCATGCTCG AGGCCGGTTT CGTCCGGACC AAGCACACCG CCGCAATCTG TCTCAAGAAT
ATTGCGCTCT ACTCGATCGC CGGCATCATG TTCTATCTGG TCGGCTACCA GGTCATGTAT
GGTGGTCAGA CTCCCTATTT CGGGATCCCG GAATTGTGGG TACCGTCCGA ACTGGCGGCA
GACGAGTCCA TCGACATTGG TACCGGCTAT GCTGCCGCGT CAGACTGGTT CTTCCAGATG
GTCTTCGTGG CCACCGCGGC GTCGATCGTG TCCGGCACCA TCGCTGAACG GGTCAAGCTC
GGACCCTTCT TCATCTTCGT GATCGTCCTG ACTGCTGTGA TCTATCCGAT CCAGGGCAGC
TGGGAATGGG GCGGCGGCTG GCTGGATGCC GATTTCGGCT TCTCTGACTT TGCCGGGTCC
ACGCTGGTAC ATTCCACCGG TGGCTGGGCA GCCCTGGCCG GTGCCATCCT GCTGGGTGCC
CGTTCCGGAC GCTTCGGGCC GGATTCCAAG CCGATGATGC CTGGCTCCTT GCCGCTGGCG
ACGCTCGGTA CCTTCATCCT GTGGTTCGGC TGGTTTGGCT TCAATGGCGC CTCCCAGCTG
GCACTCGGGT CCGCCGGCGA TGCCGTTGCC ATCTCGCAGA TCTTCGCCAA CACCAACATG
GCCGCGGCCG GTGGTGTCGT GACCGCTTAC CTGCTCTCGA TGCTGCTGGG TGGTGGCAAG
GCCAATCTGG CTTACTGCCT CAACGGCGCC CTTGCCGGCC TGGTCGCCAT CACGGCCGAG
CCGCTGACCC CGACCATCCT GCAGGCCATC GCTATCGGCG CGGTTGGCGC TGTGATCGCC
ACCTTCGGTG CCAAACTGCT GGAAATGGTC CGCATCGACG ATGTCGTCGG CGCGATCCCG
GTCCACCTGT TCGCGGGTAT CTGGGGCACC ATGGCGGTTC CGCTCACCAA CTCTGACGCG
ACCTTCTTCG GTCAGGCCGT CGGTGTCGGT GCAATCGGGG CCTTCGTGTT CGTGACCAGC
TTCGTTGTCT GGATGATCCT GAAAGTCTCC GTTGGCATCC GTCTTTCGCC GGACGCCGAA
AATGTTGGCG GAGACCTGTC CGAACTTGGT CACGACGCCG GCTCGATTTT CGCGTCAGAC
GTGGGAAAGG ACTCGGCCCC GGCGCAGTAA
 
Protein sequence
MIGRTQMSKT LARGALCAVV AGIGLTGAAH AEVSEETAFV FNTLLFLIGG FLVMLMAAGF 
AMLEAGFVRT KHTAAICLKN IALYSIAGIM FYLVGYQVMY GGQTPYFGIP ELWVPSELAA
DESIDIGTGY AAASDWFFQM VFVATAASIV SGTIAERVKL GPFFIFVIVL TAVIYPIQGS
WEWGGGWLDA DFGFSDFAGS TLVHSTGGWA ALAGAILLGA RSGRFGPDSK PMMPGSLPLA
TLGTFILWFG WFGFNGASQL ALGSAGDAVA ISQIFANTNM AAAGGVVTAY LLSMLLGGGK
ANLAYCLNGA LAGLVAITAE PLTPTILQAI AIGAVGAVIA TFGAKLLEMV RIDDVVGAIP
VHLFAGIWGT MAVPLTNSDA TFFGQAVGVG AIGAFVFVTS FVVWMILKVS VGIRLSPDAE
NVGGDLSELG HDAGSIFASD VGKDSAPAQ