Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmar10_0264 |
Symbol | |
ID | 4284128 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Maricaulis maris MCS10 |
Kingdom | Bacteria |
Replicon accession | NC_008347 |
Strand | + |
Start bp | 312777 |
End bp | 313460 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 638139727 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_755495 |
Protein GI | 114568815 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.70124 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAAGC GAACCATTGT CATCACTGGC GGTGCGGGGA TTTTGGGGCA GGCAGTTGCG GGTCGGGCTG TGGCGGCCGG CTGTCAGGTC GCGCTCATAG ATCGTGCGCC GATCGCGGAT GATGACAGCC TTGCCGGGCA CCTGCGCCTG GGCGGAGTTG ATCTGACGGA CCGTGAGTCC GCCGGTGCTG CTTTTGCCGC CATCGCGACG GAGTTCGGCG GCTTTGATGT GCTGATGAAC ATTGCCGGTG GTTTCATCTG GGAAACGCTG GAAGGCGGCA AGGTCGAAAG CTGGGAGCGC ATGTTTGCCA TCAATGTGCA GACGGCTGTC ACCGCCTGCC AGGCTGCCAT GCCCTGGTTG TGCGAAAGCG CTTCCGGACG GATCGTCAAT GTCGGCGCTG CCGGCGCAAT CAAGTCGGAC GTCGGCATGG GCGCCTATGC GGCCTCGAAA GCCGGTGTCG CCCGGTTGAC TGAAAGCCTG TCTCGCGAAC TTCTTGGCAA GGTGACGGTC AATGCGGTCC TGCCCTCTGT TCTGGACACG CCGACCAACC GTGCCGACAT GCCAGACGCC GATCCGGCTG ACTGGGTTGC GCCTGAAGAT CTCGCCGCCG TGATGCTGTT TCTGGCGAGT GAAGAGGCTT GTGCCGTTAC AGGCGCCCTG CTGCCGGTGA CCGGGCGCGT CTGA
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Protein sequence | MAKRTIVITG GAGILGQAVA GRAVAAGCQV ALIDRAPIAD DDSLAGHLRL GGVDLTDRES AGAAFAAIAT EFGGFDVLMN IAGGFIWETL EGGKVESWER MFAINVQTAV TACQAAMPWL CESASGRIVN VGAAGAIKSD VGMGAYAASK AGVARLTESL SRELLGKVTV NAVLPSVLDT PTNRADMPDA DPADWVAPED LAAVMLFLAS EEACAVTGAL LPVTGRV
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