| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_0246 |
|---|
| Symbol | |
|---|
| ID | 4286366 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Maricaulis maris MCS10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008347 |
|---|
| Strand | + |
|---|
| Start bp | 262475 |
|---|
| End bp | 265321 |
|---|
| Gene Length | 2847 bp |
|---|
| Protein Length | 948 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 638139709 |
|---|
| Product | TonB-dependent receptor |
|---|
| Protein accession | YP_755477 |
|---|
| Protein GI | 114568797 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0000304419 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 59 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCAATC TTGGATTCAA GAAGGCGTTT CTTGGCTCGA CATCGCGCGT CGCGATTGCC
AGCTTGGTCA GCCTTTCCGG CGCCATGGGG GCGTCAAGCT TCGCTCAGGT CAGTGACGAC
GGAGACGAAG CTGAGGACGT CATCGTTATT ACGGTGGAGC GCCGAGAGCA GAGCCTTCAG
GACCTTGCCG GCACAGCAAC CGCGTTCGAT GGCGACGAGA TGAAATTGCT GGGGGTGCAG
AGTATTGCTG ACCTCAACGG ACGTTATCCC GGCCTTCAGA TCGGTAACAA CCAGGGCAAT
ATCGAAGTCT TCATCCGCGG TGTCGGCTCG ACCAACAACA CCGAGCTGGG TGAACCCGCT
GCCGCAACCC ATATGGACGG CATCTACATT CCGCGTCCAA GCGGGTTTGG TTCGGCCTTC
TTTGACATCC AGCGTGTCGA GGTCAATGTC GGTCCGCAAG GAACCCTTCG CGGGCGAAAC
GCGACAGCCG GTTCGGTCAA CGTCATTCCA TGGGGGCCGG GCCTGGGTGT GTTTGACCTG
GCTGCCGAGG CGAGCATCGG CAATTATGGC GAGCGCTCCT TCGAGGGGGT GATCAACGTA
CCGGTGAGCC AGAACGCCGC GTTCCGCCTT GCCGGTTACG CGATGTCGCA TGACTCCTAT
TACGAAAATG CCTCTCCGAC GAGTTCCGAC CTGGGCGTCA GTGTCCCGAC CGCGTCTTCA
GAGGGCGTTG AAGTAGCGGA AGCCGCTGAC AATTGGGGCG CCCGCGCCAG CTTCCTGGTC
GAGCCGACCT CGCGTTTGAC CATGACATTT ACTGCTGACT ATCTGTCCGA AGGCGGAACG
GGATACACCG GAACAAATTA CGCCAACCCG TTGGGCAATG GGCTCACCCC GTCCGAAATC
AGCGACCCGC GTTCGGTTAT CGGTCGCGCA ATGTCGCCGG AGCTCGACAC GGTTCACTGG
GGCCTGAGGG CCCACCTTGA GTACGAAACA GACTGGTTCA ATGTCGAATA TATCGGCGGT
CATCGGGACC TTGTTTATGA CTACAAGGCT GCGACACCCC TCTCGCCCTT CTACCCAGGC
GTCATCGACA ACCTCCGCAA CCCGGCCGAC GGCAATCTCG ACGAAGCCTT CGATAATTTC
TCGTTGTTCC AGTCGGTTAC GGACTCCGTG TCCCAGGTCC ACGAAATCCG GTTCTTCGAT
GAACTGGACA ATGGCGCGGT CTGGAATGCC GGCGTTTTCG CGTTCTCGGA AGACCAGCGG
ACCTTCCTGG GAACAACTGG CGATCGGGGG CTTTTCTTCT CGGGTCTGGA ATTCAACCAG
CGGACCGAAA CCGAAGCGTT TGCCGTCTAT GCGGACGGAA CCTACCCGAT CACCGATACG
TTCCGGGTGA CCGCGGGGGT CCGCTACTCT GAAGAAGAGA AGACGAGAAC CGGGGTCAAT
GCGCGGTACG GGTTCGCCAT AGGTGGCGCC GGCTATAGCT GTTGCGGTGG TGTCCGGGTG
GGCACCGAAG GCTTTGAATT CAACGTCTTC GACCGGACAA TCATGAATCC GGACATTGAT
GGTGACGGCA CCGTCACCGA GGCGGAAACG CTGGCTTTCT ACATGGACGG CATTCGCACA
TTCGGTGCCC GCGACAATGT CGATGACATC TTCGCCAATG GCCCGCTTGT CGGCGTCGAC
CTCGCCAACC CGACTCAGAT CGCGTCCTAT CCTGTCTGTG TCGATACGAT CGCCGGTGAC
TTCTTTACCT GTCCGTCGCC GACGGACGGC ATCCCATGGG ATGACGCCGC AACCGGTATC
TTTACGTTCG CGCTTCCTTT CCTTGGCCAG ATCGCACCGC AGAACGGATT TGCGTCGTTC
GACTTTGTCG ATTGGCGTCT GCGTGGTGAG TGGGACCTGA CCGAGACCAA CCTGTTGTAT
GCCTCGGTCA GCACCGGCCA CAATGGCGGC GGCTTCAATG ACAACCTGCC ATCTGTAACC
GGCGTCACGA TCAATCCGGC CGGCGGCGGA ACGGCGCCGT TTGATACGTC TGAACTCGCT
CCGACCTTCA ATGAGGAGAG TGTCGTCGTT TATGAGGTCG GCTCGAAAAA CGAGTTCGAC
ACACCGGATG GGCGCGGCTA TTTCAACGCC TCCGCGTTCT ACTATGACTA CTCTGACCTG
ATCCAGAATG TCCTGCTTTC TGTCGGCCAG ATCCTGGACA CGTCTGATGT GCCGCTGGAC
ACGACGGCGG CCCCCGGCTC GGCATTGGGC CTCGTGGTCA ATTTCAATTT CAACGCTTCC
GACGCCGAAA TCTACGGTGC CCAGTTCGAG GCAGGCTATG ACCTGCCCTA TAACCTGCAA
TGGAAGGGTA CATTGCTCTG GATGCCGGTG GCCCGAATCC AGAACTCGGA GCTGATTGCG
GACTCCCGAT TCCAGGCCGA TGTGGCGCCC TTGCAGGCCA TTCCGCAGTC GATCGACGGC
TTCCGCCTGC GCCGGACGCC GGAATGGAGT ATTCAGACCT CGATCAGTCA GGCCCTGAGC
TTCGATCACG GGGACGCGGA CTGGATCATC TCATTGGGCT ATCGCACCGA GCAGCATCAG
GATCTGTTCA ACGGCGAGGT TTATCCCGAG TTTGATTTTG CGAATGACGA CCCACTTCGC
CTCAATGATC TCGTGGATGG ATATCTGACC GTCGACGCCG GTGCCGGCTA CAATCCGGGC
GGCAATGAAA ACCTCCGGAT CGAAGCCTAT GTCCAGAATG CCACGGACGA GCAAAGGGAG
CAGGCGATTG TCATCACCCA GTTTGACAAC ACTCGTTTCT TCTCGCGCCC GCGCACTTAT
GGTCTGCGTT TCCGCTGGCG CCGGTAG
|
|---|
| Protein sequence | MFNLGFKKAF LGSTSRVAIA SLVSLSGAMG ASSFAQVSDD GDEAEDVIVI TVERREQSLQ
DLAGTATAFD GDEMKLLGVQ SIADLNGRYP GLQIGNNQGN IEVFIRGVGS TNNTELGEPA
AATHMDGIYI PRPSGFGSAF FDIQRVEVNV GPQGTLRGRN ATAGSVNVIP WGPGLGVFDL
AAEASIGNYG ERSFEGVINV PVSQNAAFRL AGYAMSHDSY YENASPTSSD LGVSVPTASS
EGVEVAEAAD NWGARASFLV EPTSRLTMTF TADYLSEGGT GYTGTNYANP LGNGLTPSEI
SDPRSVIGRA MSPELDTVHW GLRAHLEYET DWFNVEYIGG HRDLVYDYKA ATPLSPFYPG
VIDNLRNPAD GNLDEAFDNF SLFQSVTDSV SQVHEIRFFD ELDNGAVWNA GVFAFSEDQR
TFLGTTGDRG LFFSGLEFNQ RTETEAFAVY ADGTYPITDT FRVTAGVRYS EEEKTRTGVN
ARYGFAIGGA GYSCCGGVRV GTEGFEFNVF DRTIMNPDID GDGTVTEAET LAFYMDGIRT
FGARDNVDDI FANGPLVGVD LANPTQIASY PVCVDTIAGD FFTCPSPTDG IPWDDAATGI
FTFALPFLGQ IAPQNGFASF DFVDWRLRGE WDLTETNLLY ASVSTGHNGG GFNDNLPSVT
GVTINPAGGG TAPFDTSELA PTFNEESVVV YEVGSKNEFD TPDGRGYFNA SAFYYDYSDL
IQNVLLSVGQ ILDTSDVPLD TTAAPGSALG LVVNFNFNAS DAEIYGAQFE AGYDLPYNLQ
WKGTLLWMPV ARIQNSELIA DSRFQADVAP LQAIPQSIDG FRLRRTPEWS IQTSISQALS
FDHGDADWII SLGYRTEQHQ DLFNGEVYPE FDFANDDPLR LNDLVDGYLT VDAGAGYNPG
GNENLRIEAY VQNATDEQRE QAIVITQFDN TRFFSRPRTY GLRFRWRR
|
|---|
| |