Gene Mmar10_0232 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmar10_0232 
Symbol 
ID4283904 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMaricaulis maris MCS10 
KingdomBacteria 
Replicon accessionNC_008347 
Strand
Start bp247031 
End bp247786 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content62% 
IMG OID638139696 
Product2-deoxy-D-gluconate 3-dehydrogenase 
Protein accessionYP_755464 
Protein GI114568784 
COG category[I] Lipid transport and metabolism
[R] General function prediction only
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01832] 2-deoxy-D-gluconate 3-dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTTT CATTCAACCT CGACGGCAAG GTTGCGCTGG TGACCGGCGG CAATACCGGG 
CTGGGTCAGG CAATGGCCAT CGCCCTGGCC CAGGCAGGAG CCGACATTGT CGTGGCCGGT
CGCTCCAGTG CGGCCGAAAC CGGCGAAGCG GTCGAATCCG CCGGCCGGAA ATTCTACGAA
ATCAAGGCCG ACTTTTCTGA TCCGTCCTGT GTTGAGGGTG TGGTGGCCAC GACGGTCGAG
CAGGCCGGCC GGATCGATAT CCTGGTCAAC AATGCCGGCA TCATCAAACG CAATGACGCG
CTCGATTTCA CCCAGGATGA CTGGGACAGC GTCATGGATG TCAATATCAA GTCGGCCTTC
TTCCTGTGCC AGGCGGCGGC GAAGCGTATG GTGGCTCAAG GCAGTGGCAA GATCATCAAT
ATTGCCTCCA TGCTGTCCTT CCAGGGCGGT ATCCGGGTGG CGTCCTATAC CTCCTCCAAG
AGTGCGATTG CCGGCCTGAC CAAGCTTCTG GCCAATGAGT GGGCCGCAAA AGGCATCAAT
GTGAATGCCA TCGCACCCGG CTATTTCGCC ACCAACAACA CGGCTGCCCT GCAGGCTGAT
CCTGACCGTA ACGAACAGAT TCTCGGCCGT ATCCCGGCCG GGCGCTGGGG CGACCCGTCG
GATATTGGCG GCGCCGCCGT CTTCCTGTCA TCCGCGGCGG CTGACTACGT CCACGGCACG
GTACTGGCCG TCGATGGTGG CTGGCTCGCC CGCTAG
 
Protein sequence
MSLSFNLDGK VALVTGGNTG LGQAMAIALA QAGADIVVAG RSSAAETGEA VESAGRKFYE 
IKADFSDPSC VEGVVATTVE QAGRIDILVN NAGIIKRNDA LDFTQDDWDS VMDVNIKSAF
FLCQAAAKRM VAQGSGKIIN IASMLSFQGG IRVASYTSSK SAIAGLTKLL ANEWAAKGIN
VNAIAPGYFA TNNTAALQAD PDRNEQILGR IPAGRWGDPS DIGGAAVFLS SAAADYVHGT
VLAVDGGWLA R