| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_0107 |
|---|
| Symbol | |
|---|
| ID | 4283850 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Maricaulis maris MCS10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008347 |
|---|
| Strand | - |
|---|
| Start bp | 109646 |
|---|
| End bp | 110188 |
|---|
| Gene Length | 543 bp |
|---|
| Protein Length | 180 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 638139571 |
|---|
| Product | OstA family protein |
|---|
| Protein accession | YP_755341 |
|---|
| Protein GI | 114568661 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1934] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR03002] lipopolysaccharide transport periplasmic protein LptA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 0.587032 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCTGC TAGCAATCTC CCTGTTCGGA ATGGCCGCGG CAGCATTGCC GACCACCGCC
GCGTCGGCGC AAATCGGGAA CTCGTCGCTG CCGTTGGACA TCGAAGCCGA AACCTTTGAG
GTGCTCGATG CCGAGCGACA CATTGTCTGG CTGGGCAATG TCCATGTCGT CCAGGGCGAT
TCGAGCCTGC AGGCCGATCG GATGGACGTT TACTACACCG GCGAGGGGCC CGGCGGCGGC
TGGGGTGATA TCGACCGCAT CGTCGCCACC GACAATGTCT TCTATATAAC ACCGGCCCAG
CGGGCGCGCG GCGATCGCGG CGTCTATGAG CTGGCCGAGG AAGTGATCAC CCTGACCGGC
GATGTCGTCA TCACACAGGG CGACAATGTC ATTACCACCA CCCGTTTCGT GAATAATCTG
ACCACCGGAA ACTCCAATTT CGGAGAGGCG GGTACCGGCG AACGCGTGCG CATGGTGCTT
CAACCGGCCC GCTCGACCGA CACCACGGAA TCCTCCGAAG CGGCCGAAAC CCCCGAAGGC
TGA
|
|---|
| Protein sequence | MRLLAISLFG MAAAALPTTA ASAQIGNSSL PLDIEAETFE VLDAERHIVW LGNVHVVQGD
SSLQADRMDV YYTGEGPGGG WGDIDRIVAT DNVFYITPAQ RARGDRGVYE LAEEVITLTG
DVVITQGDNV ITTTRFVNNL TTGNSNFGEA GTGERVRMVL QPARSTDTTE SSEAAETPEG
|
|---|
| |