Gene Mmar10_0103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmar10_0103 
Symbol 
ID4283846 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMaricaulis maris MCS10 
KingdomBacteria 
Replicon accessionNC_008347 
Strand
Start bp105994 
End bp106458 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content66% 
IMG OID638139567 
ProductPTS IIA-like nitrogen-regulatory protein PtsN 
Protein accessionYP_755337 
Protein GI114568657 
COG category[G] Carbohydrate transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) 
TIGRFAM ID[TIGR00848] PTS system, fructose subfamily, IIA component
[TIGR01419] PTS IIA-like nitrogen-regulatory protein PtsN 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTTAG CTGATTTGAT CCCCAATGCG GGAATAAGCA TTGATTTGGG TGCGTCCAGC 
CGGAAACAGG CCCTTCAGGC CATGTCCGAA CTGGCCGCCA CGGTTACGGG ACAGGCGTCC
CGAACCGTTT TCGATGCCGT GCTTCAGCGC GAACGCCTCG GCTCCACCGG AGTCGGACAG
GGTGTTGCCA TTCCCCATGC CCGCCTGAGC GGGATGGATG AGGTGGTCGG CATTTTTGCC
CGGCTCCGGA CGCCGGTCGA CTTCGAGTCG ATCGACGGTC GGCCCGCCGA TCTGATCTTC
ATGCTGCTGG CACCTGAAAA CGCCGGCGCC GAACACCTCA AGGCGCTGGC CCGGGTGTCA
CGCCTTCTGC GCCGGGAAGA TGTCCGGCAG CGCCTGCGTG CGGCTCCCAA CGCCGATGCC
GTACACGCGG TCCTGGCCGG CGAACCGGCC TCGGACGCCG CCTGA
 
Protein sequence
MALADLIPNA GISIDLGASS RKQALQAMSE LAATVTGQAS RTVFDAVLQR ERLGSTGVGQ 
GVAIPHARLS GMDEVVGIFA RLRTPVDFES IDGRPADLIF MLLAPENAGA EHLKALARVS
RLLRREDVRQ RLRAAPNADA VHAVLAGEPA SDAA