| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_0019 |
|---|
| Symbol | |
|---|
| ID | 4283973 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Maricaulis maris MCS10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008347 |
|---|
| Strand | + |
|---|
| Start bp | 23347 |
|---|
| End bp | 24231 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 638139479 |
|---|
| Product | diaminopimelate epimerase |
|---|
| Protein accession | YP_755253 |
|---|
| Protein GI | 114568573 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0253] Diaminopimelate epimerase |
|---|
| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTGTGCCG CAATTAACAC CGGAGCGGTG CTGGACGTAA AGGGACGGGA GCGTTATCGC
AGCAGGATGA TCGCTCGTCT GATGAATGGT GCCGGCAACA AGTTCATCCT CGCCGATGTG
CGCGGCCGGG CTGGTGTGTT CAACCTGTCG GCGGATTCGG TGAAGGCGAT GGCACGCGCC
CACCCGTTCG ACCAGCTTCT GGTGCTGGAA GACAGCGACA CGTCGGACGC CTTCATGCGT
ATCTGGAATT CCGACGGCGA CGAGGTCGGC GCCTGCGGCA ATGGGACCCG CGCTGCGGCC
TGGGCGATGA TGCAGGAAAC AGGTTCCGAC ACGCTGAGCC TCGACACCGC AGGCGGTGTC
CTGTTGGCCC GCGATGCCGG TCCGATGTCA GTCAGCGTCG ACATGGGTGA GCCCCGCCTG
GACTGGACGG AAATTCCGCT CGTCCGCCCG ATGGACACCC TTCAGCTCGA CTTCGCCGTG
GAGAAGGATG GCGTCCGGAT CGAGGCACCC GGGGCCGTTT CGATGGGGAA TCCCCACGCG
GTCTTCTTCA TCCGCGACAT CGCCAACTTT CCGGTCACCG GTCTCGGCCC GGTCGTCGAG
CATGCCCCGC TGTTTCCGGA GCGGGTCAAT GCCGGTTTCG CGCAGATCCT GGACGCCCGC
CATATCCGGT TGCGCGTCTG GGAGCGGGGC GCCGGTATCA CGGCCGCCTG CGGTACCGGC
GCCTGCGCCG CGCTGGTCGC CGCACACAGG CGGGGCCTGT GCGATCGCCA GGCCATGATC
CATGCCGATG GCGGCGATCT TTCGGTCGAA TGGCGCAAGA GCGACAACCA CGTCATCCTG
ACCGGGCCGG TCGAGGATGA AGGACCGATT GAACTGGACA TCTGA
|
|---|
| Protein sequence | MCAAINTGAV LDVKGRERYR SRMIARLMNG AGNKFILADV RGRAGVFNLS ADSVKAMARA
HPFDQLLVLE DSDTSDAFMR IWNSDGDEVG ACGNGTRAAA WAMMQETGSD TLSLDTAGGV
LLARDAGPMS VSVDMGEPRL DWTEIPLVRP MDTLQLDFAV EKDGVRIEAP GAVSMGNPHA
VFFIRDIANF PVTGLGPVVE HAPLFPERVN AGFAQILDAR HIRLRVWERG AGITAACGTG
ACAALVAAHR RGLCDRQAMI HADGGDLSVE WRKSDNHVIL TGPVEDEGPI ELDI
|
|---|
| |