Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmar10_0005 |
Symbol | |
ID | 4283959 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Maricaulis maris MCS10 |
Kingdom | Bacteria |
Replicon accession | NC_008347 |
Strand | + |
Start bp | 4854 |
End bp | 5510 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638139465 |
Product | TetR family transcriptional regulator |
Protein accession | YP_755239 |
Protein GI | 114568559 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0576727 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 0.763846 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCAAG GGGTGCGGCC GACGCAACAG GCGAGATCAC GCGAAACACG CGACAGGTTG GTGCGTGCGC TCGATACCAA GTTGCGCGAA AAGGCCTTCG CCGATGTCAC CATAGCCGAG CTGGCTGACG CCGCCGGCCT GTCAGTCGGC GCTGTCTATC GTCGGTTCGA GAACAAGGAT GCCTTCATAC CGGTCATCTT CGAACTGTAT CGCGAGCGCC TCGAGATTTT CATGGCCGGT GAGGGCCGGC TCGAGATCGA ACCCGCTGAG GGGTTGCGGG CGGCGCTCCA TGCGGCATGC CGCACCGGGT GGCGGTTTCT CGACCAACAC GGCTATCTGG TCCGGGCGGC CCACATATAC AGCCGACTGC GTCCGGACCT GATCGGGGAT GACTGGGAAG CCATGCTCGA CCAGGCCCGG GAGTCCGCCA AAAGCCTGCT TGACGTCTTC GGTGATGAGG TGAAGCGGAC CGATCGGGCC GAGGCCGCAC AGATGTTCAC CTACCTGATG AATACCCTGC CGATCGAGCG GGCCATCTAT CCTGATGAGG GCGCCGCCGC TGTGCTCACC CTTGGCGAAG AACAATTCGT CGCGGCCATC GCTGACACGC TTTACGGCTA TCTCGTCACA CCGGATCGGG GGCAGCCGGA CGGATGA
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Protein sequence | MSQGVRPTQQ ARSRETRDRL VRALDTKLRE KAFADVTIAE LADAAGLSVG AVYRRFENKD AFIPVIFELY RERLEIFMAG EGRLEIEPAE GLRAALHAAC RTGWRFLDQH GYLVRAAHIY SRLRPDLIGD DWEAMLDQAR ESAKSLLDVF GDEVKRTDRA EAAQMFTYLM NTLPIERAIY PDEGAAAVLT LGEEQFVAAI ADTLYGYLVT PDRGQPDG
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