Gene Swol_2472 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_2472 
Symbol 
ID4282909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp2803236 
End bp2804576 
Gene Length1341 bp 
Protein Length446 aa 
Translation table11 
GC content46% 
IMG OID638139356 
Productpeptidase M23B 
Protein accessionYP_755132 
Protein GI114567978 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0739] Membrane proteins related to metalloendopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000997494 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGAATT TATTGCAGCA ACACCGCCGC TACACGCCCT TGGGACTGAT TTTAGGTGGA 
CTTATTTTCC TTTTTGTGAT GTCCTCACTG GGAGTACAGA TGCCAGCTTA TTCAGTCTTT
ATTGACCAGC AGGAAAAGTT CCAAACCGAT GACCCCGAGG CGGTTAATCT GGCGCTACAA
CGCATAATAG CTCAGGAAAG AAAACGATGC CAGCAGGACA TAGACCTGGT TAACCAGGTG
GAAATAGAAA AGGTTTTTGC CAAGCGGGAG AATATTATTC CGGCGGAAGA AGTGGAAAAA
GAGCTTCGCA AAAACCTGCA ATTTGAATCC CTGGCCACCT CCATTGTGGT AGATGGAAAG
GCCGTAGCTT CAGTTAAAAG TCGGGAACTG GCGGAAAAAA TATTGAACAA TTTAAAAAGA
GAATATTCCT GGCTGGATGA GGGGGAAGAA CTGTTGGAAG TTACCTTTGC GGAAAAGGTA
GAATTGCGAG ATACCAAAGT GCCTTCCCAG GAGATAATTG AACCCCCACA GGCTTATCAA
TTGATTAAGA TTGGCACTAA TAATCCGGAG AAATACCTGG TTAAAGAGGG GGATTCCCTC
TGGCTGATAG CCCGGCGCAA TGATATGTAT GTGAATGATA TTGTAGTGGC CAACAACCTG
AATTCCGACA AGCTATCTTT GGGACAGGAA TTACTGCTGG TTAAAAGCAA GCCCTATATA
ACGGTAATGA CTCAGGTTAA AGGGGAAAGA GTGGAAGCCA TTCCTTTCCA GACCAAGGTG
GTAGTGGATA CCTCAGCCGG TACTTCGGTG CGGGTCAAAC AGGAGGGGAA AAATGGGGAG
AAACAAGTGG TTTACCAGGC CACCAAGCTC AATGGCGTAC TTCAAGAAAA AGATGTAAAA
AACGAGAAGA TTTTGCGGGA AGCAGTGGAT AAGATAATCG TCAAAGGCAA CCGAGTAGTG
AGAATCGCTT CCCGTTCCGG CTCAGGAAAC CTGGAATGGC CTACCTATGG CCCTATTACC
CAGTATTATA AAGGAAAAGG CCATACGGGA TTAGATATAG GAGCTCGCAG TGGGACCAGT
ATAAGAGCCG CGGATGCCGG TTATGTCGCT TCGGCCTGCT ATCAAGGAGG ATATGGTAAA
TTCATTACCA TCAACCACAA TAATGGTCTG GTTACTCGTT ACGCACATTG TTCCAGTATA
GCAGTATCTG AAGGACAGAG TGTTTCCCGG GGAGAAGTGA TTGGCACCGT GGGTTCCACC
GGCAGGAGTT CCGGTCCCCA CCTGCATTTT GAAGTATTGT CCGGCGGGTC TTTTCAAAAT
CCGTTAAACT ACTTGCCTTA A
 
Protein sequence
MLNLLQQHRR YTPLGLILGG LIFLFVMSSL GVQMPAYSVF IDQQEKFQTD DPEAVNLALQ 
RIIAQERKRC QQDIDLVNQV EIEKVFAKRE NIIPAEEVEK ELRKNLQFES LATSIVVDGK
AVASVKSREL AEKILNNLKR EYSWLDEGEE LLEVTFAEKV ELRDTKVPSQ EIIEPPQAYQ
LIKIGTNNPE KYLVKEGDSL WLIARRNDMY VNDIVVANNL NSDKLSLGQE LLLVKSKPYI
TVMTQVKGER VEAIPFQTKV VVDTSAGTSV RVKQEGKNGE KQVVYQATKL NGVLQEKDVK
NEKILREAVD KIIVKGNRVV RIASRSGSGN LEWPTYGPIT QYYKGKGHTG LDIGARSGTS
IRAADAGYVA SACYQGGYGK FITINHNNGL VTRYAHCSSI AVSEGQSVSR GEVIGTVGST
GRSSGPHLHF EVLSGGSFQN PLNYLP