| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_2408 |
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| Symbol | rho |
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| ID | 4281812 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008346 |
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| Strand | - |
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| Start bp | 2738316 |
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| End bp | 2739593 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638139292 |
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| Product | transcription termination factor Rho |
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| Protein accession | YP_755068 |
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| Protein GI | 114567914 |
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| COG category | [K] Transcription |
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| COG ID | [COG1158] Transcription termination factor |
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| TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000414081 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAATATCT CAGAGCTAGA GAACAAAACC ATGCTGGAGC TATACCAGGT TGCCAGAGAT
TTAAACCTGG CAGGTTATTC CAAGCTCCGC AAAAAGGAAC TGGTTTTCGA AATAACCAAA
GCCCTAACCC ATGCTGACCA ATTGCTTCAG GCCCAGGGAG TACTGGAAAT CATGCCAGAT
GGATATGGAT TTTTAAGGCC ATTCGCTTAT CTGCCCAGCC AGGAGGACAT CTATGTATCT
CCGTCTCAAA TCAGAAAGTT TGAATTAAAA ACGGGGGATC GGGTCGGGGG ACAGGTAAGA
TCGCCCAAGG ATAATGAAAG ATTCTTTGCT CTTTTAAAAG TGGAAGATGT TAATGGATTT
TCTCCGGAAG AGTCAGTAAA GAGGATACAT TTTGATGCCC TAACCCCTCT CTATCCTACG
GAGAAACTAA CCCTGGAGAC CGTGCCTCAC GAGCTACCCA CCCGTATAAT TGACCTGGTG
GCCCCCATCG GCAAAGGCCA AAGAGGCCTG ATAGTAGCAC CACCCAAGGC AGGAAAGACC
ATTCTTTTAC AAAAAATTGC TCAGGGGATA AGTGCGAATT ATCCGGATAT TGAGCTTATA
ATCCTGCTGG TGGATGAAAG ACCGGAAGAA GTTACCGACA TGCAGCGTTC CACTAAGGCT
GAAGTGGTAG CCTCAACCTT TGACGAACCT CCGGAAAACC ATGTTAAAGT CACCGACATG
GTTTTAGAGA GGGCCAAAAG ATTGGTAGAA CATAAAAAAG ATGTGGTTAT TCTGATGGAT
AGTGTTACGC GTATGGCCCG GGCTCATAAC CTGGTGGTGC CACCGAGCGG CAGGACTCTA
TCCGGAGGGA TAGATCCAGC ATCCTTGGAC AAACCTAAGC GCTTCTTCGG TGCGGCTCGC
AATATTGAGG AAGGTGGAAG CCTTACAATT ATCGCTACCG CTTTGATTGA AACCGGGTCT
CGTATGGATG AAGTCATTTT TGAAGAATTT AAGGGTAGGG GTAATATGGA ACTGGTATTG
GATCGTAAAT TATCCGAGCG CAGAATATTC CCCGCCATTG ATCTTAAACG TTCTGGAACC
AGGAAAGAAG AATTGCTGTT GAATAATGAG GAAATGGAAC TAACCTGGAA TCTCCGCAAC
GCCTTTAGTG ATTATAATCA GATAGAGAGT ATGCAGCTAA TGATTGATAC TATGAAAAAA
ACCAGATCCA ACAAGGATCT CTTACGCGCC GCCCCGCTGG TATTTGGCCG CAAAGAACAT
GCCAGAAGCG CCTATTAA
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| Protein sequence | MNISELENKT MLELYQVARD LNLAGYSKLR KKELVFEITK ALTHADQLLQ AQGVLEIMPD
GYGFLRPFAY LPSQEDIYVS PSQIRKFELK TGDRVGGQVR SPKDNERFFA LLKVEDVNGF
SPEESVKRIH FDALTPLYPT EKLTLETVPH ELPTRIIDLV APIGKGQRGL IVAPPKAGKT
ILLQKIAQGI SANYPDIELI ILLVDERPEE VTDMQRSTKA EVVASTFDEP PENHVKVTDM
VLERAKRLVE HKKDVVILMD SVTRMARAHN LVVPPSGRTL SGGIDPASLD KPKRFFGAAR
NIEEGGSLTI IATALIETGS RMDEVIFEEF KGRGNMELVL DRKLSERRIF PAIDLKRSGT
RKEELLLNNE EMELTWNLRN AFSDYNQIES MQLMIDTMKK TRSNKDLLRA APLVFGRKEH
ARSAY
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