Gene Swol_2397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_2397 
SymbolprfA 
ID4282046 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp2727491 
End bp2728558 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content49% 
IMG OID638139281 
Productpeptide chain release factor 1 
Protein accessionYP_755057 
Protein GI114567903 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0216] Protein chain release factor A 
TIGRFAM ID[TIGR00019] peptide chain release factor 1 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value7.06535e-08 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCTGGAAA AATTGGATAG CCTGGAAGAA AAATATGATG AATTAACCCA TCTCTTGAGC 
CAGCCTGAGG TTCTTTCCGA CCAGGCCAGG TTTCAAAAGC TGGCCAAAGC CCACTCTGCT
CTCAGTGACA TTGTAACTAT GTACCGCGAG TATAAATCAC TATCCCGGCA ACTGGAGGAT
TCCAAAGAGA TGCTGGTTGA GGAAGAGGAT GAAGAATTCC GTCAGATGCT TGCGGATGAA
ATTCCTCAAC TACAGGAGAA AAAAGCCTCC CTCGAACAGG AATTGAGAAT ACTCTTGCTG
CCACAGGACC CCAATGATGA AAAAAGCGTA ATCATGGAAA TTAGGGCCGG TACCGGCGGG
GAGGAAGCCG CCCTTTTTGC CGGTGATCTC TTTCGCATGT ACAGCCGCTA TGCTGAGGAG
CAAGGCTGGA AAATAGAGAT AATGGATACT CATTACACCG ATATCGGAGG CATTAAGGAA
ATAGTTTTTG TGGTTGATGG GCGGGGAGCC TACAGCAAGC TGAAATTTGA ATCCGGAGTT
CATCGGGTGC AGCGGATACC AGTGACGGAA TCCGGGGGAA GGATTCATAC TTCAGCGGCA
ACAGTAGCTG TTTTGCCCGA GGCCGAAGAA GTGGAAGTAG CCATTGACCC TAATGATTTA
CGCATAGATG TTTATTGTTC CAGTGGTCCC GGAGGACAAT CGGTTAATAC CACCCAATCA
GCCGTCAGGA TAACCCATGT TCCCACGGGT GAAGTGGTAA CCTGTCAAGA TGAAAAATCC
CAGCATAAGA ATAAGGCTAA AGCCCTGCGG GTTTTGCGGG CCAGGTTGAA AGAGCTTCTG
GAGGAGGAGA AGAATGCGGA GATGGCAGGT ACCCGTAAGA ACCAGGTAGG CAGCGGCGAT
CGCAGTGAAC GTATACGCAC CTATAATTTT CCCCAGGGCC GGGTTAGCGA TCATCGCATT
AATTTGACTT TGCACCGCTT GGAGTCGGTA CTGGAAGGGC GCCTGGAGGA AATAATAAAT
GCTCTTATAG CTCATTACCA GGCTGAGCGT TTGAAACAGG TGGATTGA
 
Protein sequence
MLEKLDSLEE KYDELTHLLS QPEVLSDQAR FQKLAKAHSA LSDIVTMYRE YKSLSRQLED 
SKEMLVEEED EEFRQMLADE IPQLQEKKAS LEQELRILLL PQDPNDEKSV IMEIRAGTGG
EEAALFAGDL FRMYSRYAEE QGWKIEIMDT HYTDIGGIKE IVFVVDGRGA YSKLKFESGV
HRVQRIPVTE SGGRIHTSAA TVAVLPEAEE VEVAIDPNDL RIDVYCSSGP GGQSVNTTQS
AVRITHVPTG EVVTCQDEKS QHKNKAKALR VLRARLKELL EEEKNAEMAG TRKNQVGSGD
RSERIRTYNF PQGRVSDHRI NLTLHRLESV LEGRLEEIIN ALIAHYQAER LKQVD