| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_2362 |
|---|
| Symbol | |
|---|
| ID | 4283761 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008346 |
|---|
| Strand | - |
|---|
| Start bp | 2693787 |
|---|
| End bp | 2694887 |
|---|
| Gene Length | 1101 bp |
|---|
| Protein Length | 366 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 638139246 |
|---|
| Product | pili retraction protein PilT |
|---|
| Protein accession | YP_755022 |
|---|
| Protein GI | 114567868 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4956] Integral membrane protein (PIN domain superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.36366 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCTTAATA AACTACGTAT CTCTAAATCC TTGTTAATTC TGGGCCTCTT CTTTGGAATT
GGCTGTGTTA ATTTTGCCGG GAGGTTCTTT CAACCCGGAA GAAGCTGGCA GATTTGCCTG
GGGATAGGGG CCTTTCTCTT GTTTTATCTC CTGTCCAGCA AGATGCTTGG CTACTTTTCC
AGGCTATATT CCCGAGTAGA GGATCTAATG GATGTTACTT CAATCGATAT ACTCCTGGGA
GGGACCGGGG GCTTACTTTT GGGAATAACG ATTGGAGTAC TTTGCAGTTA TCCACTATCC
AGGATAGGTG GAGTGGGTGA TTTTTTGTCC CTGCTTGTCT TTATTCTGAG TAGTTTTTTG
GGCCTTAAGA TGGGGATTCG CCGGGGAAAA GAGCTTCTGG TTTTTCTACC CCAGTCGAGT
AAAGAAGGAG ATGAATCTTT ATCTGCTTTT AATCCCAAAG TATTAGATAC CAGTGCGATT
ATAGATGGTC GTATTTATGA TGTATGTCTG AGTAATTTCC TGGATGGTTC CTTGTTGGTA
CCAAACTTTG TTATTGAAGA ATTGCAGCAT ATCGCTGATT CCTCGGATAA TATAAGACGC
AATAAAGGTA GAAGGGGATT GGAGCTCCTA GGAAAAATGC AGAAGCATCC TCGTATAAGC
ATTAATATAA TAGAAGACGA CATAATGGAA GAAAAAGAAG TAGATGCCAA GCTGTTACGC
TTGTGCAAAC AGCTTGGTGC CAGCATCATT ACCAATGATT ATAATCTAAA TAAGGTGGCT
GAATTGCAGG GCATTAAAGT ATTGAACATA AATGAATTGA CCAATGCCGT AAAGATAATG
GTTTATCCAG GTGAAACCAT GCATACCTGT ATTGTCAGGG AAGGAAAAGA AGTGGGACAG
GGAATTGGCT ATCTGGAGGA TGGTACTATG GTAGTGGTAG AACAGGCCCA TGATGAAATT
GGGAATGATA TAGAGGTAGT TGTGACCAGC GTATTTCAGA CAGCCGCCGG AAGAATGATT
TTTACTCGTA AAGTGAAGGA AGAAAAGGAA TTTATCGTAG ATAATTTCAA AGAGGTTCAA
GGGGTGAATT TGTATGGTTA A
|
|---|
| Protein sequence | MLNKLRISKS LLILGLFFGI GCVNFAGRFF QPGRSWQICL GIGAFLLFYL LSSKMLGYFS
RLYSRVEDLM DVTSIDILLG GTGGLLLGIT IGVLCSYPLS RIGGVGDFLS LLVFILSSFL
GLKMGIRRGK ELLVFLPQSS KEGDESLSAF NPKVLDTSAI IDGRIYDVCL SNFLDGSLLV
PNFVIEELQH IADSSDNIRR NKGRRGLELL GKMQKHPRIS INIIEDDIME EKEVDAKLLR
LCKQLGASII TNDYNLNKVA ELQGIKVLNI NELTNAVKIM VYPGETMHTC IVREGKEVGQ
GIGYLEDGTM VVVEQAHDEI GNDIEVVVTS VFQTAAGRMI FTRKVKEEKE FIVDNFKEVQ
GVNLYG
|
|---|
| |