Gene Swol_2361 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_2361 
Symbol 
ID4283760 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp2693105 
End bp2693794 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content48% 
IMG OID638139245 
Product4-diphosphocytidyl-2-methylerithritol synthase 
Protein accessionYP_755021 
Protein GI114567867 
COG category[I] Lipid transport and metabolism 
COG ID[COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase 
TIGRFAM ID[TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTAACA ACCTCCGGGT TGTTATTGCT GCTGCGGGGA GTGGCAGTAG AATGGGGGGC 
AATATCAACA AGCAGTATAT CTTGTTGAAG TCACGTCCCC TGTTGGCTTA CTCACTGGAT
GTTTTTGAAA AAATGGAACT GGTAGATGAA ATCGTAATTG TAGCTCAGGC ACGCGAGATT
GAATATTGTG AGCGTGAGGT AGTAAAGAGA TTTAGCTATC AAAAGGTTAG CCGGGTAGTA
GCAGGAGGCT TGGAGAGACA GGACTCAATC TGGGCAGGAC TGGAAGAGTT GAATAGTAAT
ACAGATTTTG TGGCCGTTCA CGATGGTGCT CGGCCTTTTG TCACTTCCGA GCTGATAGAA
GAGATCTTGA AAGAGGCTGT GCGTTGGGGA GCTGCCATTC CCGGCGTTGC GGTCCGGGAT
ACTTTGAAGC AGGTGGATCG GGATAATTTT GTCCGGCAAA CCCTGGATAG ATCTAGTGTC
CTGGCTATAC AGACCCCGCA AATATTCCGG TACTGCGAAC TACATAAAGC CTATGAATAT
GCCCGGGAGC AAGGAGTGAG GGCAACCGAT GATGCCTCTC TTTTTGAAAA ATATATCGGC
CGGGTTAAAG TGGTGCCTGG AGACAATCGT AACCTGAAGA TAACTACACC CGAGGATTTG
GCCATAGCCC GGACTATTTT GGAAGCCTAA
 
Protein sequence
MVNNLRVVIA AAGSGSRMGG NINKQYILLK SRPLLAYSLD VFEKMELVDE IVIVAQAREI 
EYCEREVVKR FSYQKVSRVV AGGLERQDSI WAGLEELNSN TDFVAVHDGA RPFVTSELIE
EILKEAVRWG AAIPGVAVRD TLKQVDRDNF VRQTLDRSSV LAIQTPQIFR YCELHKAYEY
AREQGVRATD DASLFEKYIG RVKVVPGDNR NLKITTPEDL AIARTILEA