| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_2340 |
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| Symbol | |
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| ID | 4282974 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008346 |
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| Strand | - |
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| Start bp | 2670268 |
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| End bp | 2673813 |
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| Gene Length | 3546 bp |
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| Protein Length | 1181 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638139221 |
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| Product | DNA-directed RNA polymerase subunit beta' |
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| Protein accession | YP_755002 |
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| Protein GI | 114567848 |
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| COG category | [K] Transcription |
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| COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
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| TIGRFAM ID | [TIGR02386] DNA-directed RNA polymerase, beta' subunit, predominant form |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0020825 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTATCT TCTGGAAGGG AGAGAACGAT TTGTCAGAAA ATTTTGATCG GATCAGAATA
TCCCTGGCTT CCCCAGAGCA GATTAGATCC TGGAGCAGCG GAGAGGTTAA GAAACCGGAA
ACCATTAACT ACCGGACCCT GAGACCGGAG AAGGAAGGAT TATTCTGTGA GAAGATTTTT
GGGCCGGTAA AAGATTGGGA GTGCCATTGT GGGAAATACA AGCGCGTACG CCACAAAGGA
ATAGTATGTG ATCGTTGTGG TGTTGAGGTA ACCACCTCCA AGGTTAGAAG AGAGCGGATG
GGTCATATCG AACTGGCTGC TCCGGTTTGT CATATTTGGT ACCTTAAAGG AATTCCTAGT
CGCATGGGTT TGCTACTGGA TATGTCTCCC AAGGTTTTAG AAAAAGTAAT ATATTTTGTA
AGTTATATTG TTCTGGATCC CGGTGATACC CCCCTGTTGA AAAAACAATT GCTAAATGAG
CGGGAATATC GGGAGAATCG GGATAGATAC GGAGAAGCTT TTAAGGCGGG GATAGGAGCG
GAAGCGGTAA AATCTCTACT TTATGAAGTT GAACTTGATA AAATGTCCTC GGATTTAAAA
GAAGAAATAG CCACTACTAC CGGGCAAAGA AAGAGCCGGG CCATAAAACG ATTGGAGGTA
GTAGAATCTT TCCGCTTGTC GGGTAATGAC CCGATGTGGA TGATTTTGGA TGTTTTGCCG
GTTATTCCTC CGGATCTTCG ACCGATGGTA CAATTGGATG GGGGTCGTTT TGCTACCTCC
GACTTGAATG ACCTGTACCG GCGAGTGATA AACCGTAATA ACCGCTTGAA AAGGCTGCTT
GATTTAGGGG CACCGGATAT TATTGTTCGT AACGAGAAAA GAATGTTGCA GGAAGCGGTT
GATGCCCTGG TTGATAATGG GCGAAGAGGA AGACCGGTTA CCGGACCAGG CAATCGCCCG
CTCAAATCGT TAAGTGACAT GCTCAAGGGC AAACAGGGGC GTTTCCGCCA GAATCTGCTG
GGTAAACGAG TGGATTATTC AGGAAGATCC GTAATTGTAG TAGGACCTAA CCTGAAGATG
CACCAGTGTG GGCTGCCCAA GGAAATGGCT CTGGAGCTCT TTAAACCCTT TGTAATGAAA
AAGTTGGTAG ACAAGGCTAT TGCCTCCAAT ATCAAAAGCG CCAAGAAGAT GGTGGAAAGA
GGCCGGGAAG AGGTGTGGGA TATTCTGGAT GATGTAATTA AAGAGCATCC GGTACTTTTG
AATCGTGCTC CTACTTTGCA TCGCCTGGGC ATACAAGCTT TTGAACCAGT ACTGGTGGAA
GGACGTGCCT TGCAGCTGCA TCCCCTGGTT TGCACCGCCT ATAATGCTGA CTTTGATGGA
GACCAGATGG CGGTACACGT ACCCCTGTCT GCTGAGGCCC AGACCGAAGC CCGCCTGCTG
ATGCTGGCCA GTAATAATAT ATTGAACCCA AAAGACGGAA AACCGGTGGT AACTCCGACT
CAGGATATGG TTATCGGTCT TTACTACCTT ACATTTATTA GTGCGGAAGC TTTTAGTAAA
GAGAATCCCC GCGCATTTAG CAGTACGGAT GAGGCCAGGA TGGCCTTTGA ACTGGGTCAG
ATAGATTTAC ATGAAAAAAT AAGGGTAAAG ATGAGTGTGC CCCAAAAGAC CGGGCGGGAA
ATACTAAAAA GCCATGAGGC TCAGACCTTC CTGGAGGAAA TAGTAGATAC TTCTGTAGGG
AGGATTATTT TCAATGATGC TATCCCGACT AGTCTGGGAT TCTACAATGA AATAATAGAT
AAGAAAAAGC TGGGCAATAT AGTCTACGAA TGTTATCGCC TGGAAGGCAA TGCTCGTACC
GCTGACATGC TGGATAGTCT TAAAAGCTTG GGGTATGAGT TCAGTACCCG GGCCGGTATT
ACCGTGGGTG TGACTGATTT TGAAACTCCC CTGGCCAAAT ATGACATTTT ACAGGAAGCA
GATCAGGAAG TTGAGGCTAT AGAACGTGAT TACGAGGTAG GTTTAATTAC CGATGAAGAG
AGGCATGCTC AGGTGGTGGA GATTTGGAAC CAGGCTACTG ATGATGTAAC CGAGGTTTTG
AAAAATTCTT TGTCCGAAGA CAATCCGGTA TATATGATGG CCACCTCCGG TGCGCGGGGA
AATTTCCAGC AGATTCGCCA ATTAGCTGGA ATGCGGGGAC TTATGGCGGA TCCTTCCGGT
AAAATTATTG ACCTCCCTAT TAAAGCTAAT TTCCGTGAAG GATTAACCGT TCTGGAGTAC
TTTATTTCTA CTCATGGTGC CAGGAAAGGT CTGGCTGATA CTGCCTTGCG TACGGCTGAT
TCAGGTTACC TGACCCGTCG TTTGGTTGAT GTATCTCAGG ATGTAATAGT CCGCGAGGAT
GATTGTGAAT CAGTAGAAGG TATTTGGGTA GGAAGAATTA TGGAAGGCTC CCAGCTGATT
GAACCCTTGC ACCAGCGTAT CATTGGGCGG GTATCGGTTG ATACCGTTAT CCATCCTGAT
ACTGGAGAGA TACTGGTGGA GGAAAACCAG ATGATAGATG ATGATATCGG TTACGAAATT
GAAAGAGCCG GTATTGAAAA GGTTAAAATA AGAAGCGTCT TGACCTGTAA GACCAGGCAC
GGGGTTTGTA AGAAATGCTA TGGACGCAAT TTGGCTACCG GCTACAATGT AGAAATCGGC
GAAGCCGTAG GAATACTGGC AGCACAGTCT ATCGGAGAGC CTGGCACCCA GCTTACCATG
CGCACTTTCC ATACCGGAGG AGTAGCCGGG GACGATATAA CCCGCGGTCT ACCCCGGGTG
GAAGAGCTTT TCGAGGTGCG CAAGCCCAAA GGGCAGGCGG TAGTTGTAGA AGTCAATGGT
AAGGTCAGAT TTGGAGAAAA CAAAGGGCGT CGCGAGGTAG AAGTACTCGG CGAAAACGGA
GAAGTACTGG GAACCTACCC GGTTCATTAT GGCTCACGTT TGAAGTTTGA AGAAGGAACC
GAGGTGGAAA TAGGCGATGC TTTGACCGAA GGACCCTTGA ACCCGCATGA TATTTTGAAG
ACCAAGGGCC TGCAGGAAGT ACAGAGATAC CTCTTGCAGG AGGTGCAAAA AGTTTACCGC
TCCCAGGGGG TTGATATCAG TGACAAACAC ATAGAAATAA TGATTCGTCA GATGCTTAAA
AAGGTTAAGA TTGAAGACCC GGGAGATACC TCACTTTTAC CGGGAGCATT TGTGGATATA
TCCAGTTTTG AAGATGAAAA CAATCGTGAG ATCAGGGCAG GGGGTTTACC AGCTACCTGT
TCTCCTATGC TCCTGGGGAT AACCAAGGCC TCGTTGAATA CGGATTCTTT TCTTTCGGCG
GCTTCTTTCC AGGAAACAAC CAAGGTATTA ACCGAAGCGG CCATAAAAGG GAAAATAGAC
CACCTAATCG GTTTAAAAGA GAATGTCATT ATTGGCAAAC TCATTCCGGC TGGAACCGGT
TATTCAGCTT ACCGGGAAAC CAGTATCAGC GAAGCTCCGG AAAGTGAAAA TATGGTATCA
GACTAA
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| Protein sequence | MIIFWKGEND LSENFDRIRI SLASPEQIRS WSSGEVKKPE TINYRTLRPE KEGLFCEKIF
GPVKDWECHC GKYKRVRHKG IVCDRCGVEV TTSKVRRERM GHIELAAPVC HIWYLKGIPS
RMGLLLDMSP KVLEKVIYFV SYIVLDPGDT PLLKKQLLNE REYRENRDRY GEAFKAGIGA
EAVKSLLYEV ELDKMSSDLK EEIATTTGQR KSRAIKRLEV VESFRLSGND PMWMILDVLP
VIPPDLRPMV QLDGGRFATS DLNDLYRRVI NRNNRLKRLL DLGAPDIIVR NEKRMLQEAV
DALVDNGRRG RPVTGPGNRP LKSLSDMLKG KQGRFRQNLL GKRVDYSGRS VIVVGPNLKM
HQCGLPKEMA LELFKPFVMK KLVDKAIASN IKSAKKMVER GREEVWDILD DVIKEHPVLL
NRAPTLHRLG IQAFEPVLVE GRALQLHPLV CTAYNADFDG DQMAVHVPLS AEAQTEARLL
MLASNNILNP KDGKPVVTPT QDMVIGLYYL TFISAEAFSK ENPRAFSSTD EARMAFELGQ
IDLHEKIRVK MSVPQKTGRE ILKSHEAQTF LEEIVDTSVG RIIFNDAIPT SLGFYNEIID
KKKLGNIVYE CYRLEGNART ADMLDSLKSL GYEFSTRAGI TVGVTDFETP LAKYDILQEA
DQEVEAIERD YEVGLITDEE RHAQVVEIWN QATDDVTEVL KNSLSEDNPV YMMATSGARG
NFQQIRQLAG MRGLMADPSG KIIDLPIKAN FREGLTVLEY FISTHGARKG LADTALRTAD
SGYLTRRLVD VSQDVIVRED DCESVEGIWV GRIMEGSQLI EPLHQRIIGR VSVDTVIHPD
TGEILVEENQ MIDDDIGYEI ERAGIEKVKI RSVLTCKTRH GVCKKCYGRN LATGYNVEIG
EAVGILAAQS IGEPGTQLTM RTFHTGGVAG DDITRGLPRV EELFEVRKPK GQAVVVEVNG
KVRFGENKGR REVEVLGENG EVLGTYPVHY GSRLKFEEGT EVEIGDALTE GPLNPHDILK
TKGLQEVQRY LLQEVQKVYR SQGVDISDKH IEIMIRQMLK KVKIEDPGDT SLLPGAFVDI
SSFEDENNRE IRAGGLPATC SPMLLGITKA SLNTDSFLSA ASFQETTKVL TEAAIKGKID
HLIGLKENVI IGKLIPAGTG YSAYRETSIS EAPESENMVS D
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