| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_2304 |
|---|
| Symbol | |
|---|
| ID | 4283008 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008346 |
|---|
| Strand | - |
|---|
| Start bp | 2650112 |
|---|
| End bp | 2651062 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 638139185 |
|---|
| Product | DNA-directed RNA polymerase |
|---|
| Protein accession | YP_754966 |
|---|
| Protein GI | 114567812 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
|---|
| TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.044254 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGGAGA TGGAAAAACC ACGTATAGAT TGTGTGGAAA AGAATTCTAG CAGCAATTAT
GGAAGATTTG TTATCGAACC CCTGGAAAGA GGATATGGTA CTACTCTAGG GAATTCACTA
CGCCGAGTCC TGCTTTCTTC TTTGCCGGGA GCTGCAGTTA CATCCATAAA AATTGATGGA
GTACTTCATG AGTTTTCCAC CATACCCGGT GTATTGGAAG ATACTACCGA GATTATTCTT
AACATCAAAA AACTGGTCTT AAGTTATACC GGCAGCGAGC GTAAAATTAT TCGTTTGGAA
CAGCAGGGAC CAAAGGAAGT AAAGGCTTCC GATATTACAC CTGATGCTGA AGTTGAGATA
CTGAATCCGG ATTTGCATCT GGCCAGTCTG GATGAAGACG GAAAAGTAGA AATCGAAATG
ACGGTGGAGC GGGGTCGGGG TTATGTAAGT TCTGATCAGC AGCCACAGAA AAATGATGAT
ATTGTGGGCT TGATTCCCAT AGATTCCATA TTTACACCAG TGAGCCGGGT CAATTATACG
GTAGAGAACG CCCGGGTGGG AAAAAGGACG GACTATGATC GTCTGAACCT GGAAGTATGG
ACCAATGGCA GTATAAGCCC GGAGGAAGCT ATCAGCCTTT CTGCACAAAT TTTAATTGAA
TACTTAAAAC TCTTCACGGA AATAGATGAT ACCTATGCCG AGGTAGAAAT CCTGGTGGAA
AAGGAAGAGG AAAAGAAAGA CAAGATTCTG GAGATGTCCA TAGAGGAACT GGAGCTTTCA
GTAAGAGCAT CCAACGGCCT AAAAAGAGCC AGTATTAATA CGGTGGGAGA TTTGATTGCC
AAAAACCGTG AGGAAATGAG CAAGATAAGA AATCTGGGCC AAAAATCACT GGAGGAAATT
GAAAGAAAGC TTAAGGAATT AAACCTGTCG TTTAGGAAGT CAGAAGATTA G
|
|---|
| Protein sequence | MLEMEKPRID CVEKNSSSNY GRFVIEPLER GYGTTLGNSL RRVLLSSLPG AAVTSIKIDG
VLHEFSTIPG VLEDTTEIIL NIKKLVLSYT GSERKIIRLE QQGPKEVKAS DITPDAEVEI
LNPDLHLASL DEDGKVEIEM TVERGRGYVS SDQQPQKNDD IVGLIPIDSI FTPVSRVNYT
VENARVGKRT DYDRLNLEVW TNGSISPEEA ISLSAQILIE YLKLFTEIDD TYAEVEILVE
KEEEKKDKIL EMSIEELELS VRASNGLKRA SINTVGDLIA KNREEMSKIR NLGQKSLEEI
ERKLKELNLS FRKSED
|
|---|
| |