| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_2301 |
|---|
| Symbol | |
|---|
| ID | 4283005 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008346 |
|---|
| Strand | - |
|---|
| Start bp | 2647830 |
|---|
| End bp | 2648699 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 638139182 |
|---|
| Product | putative ABC transporter |
|---|
| Protein accession | YP_754963 |
|---|
| Protein GI | 114567809 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1122] ABC-type cobalt transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00300112 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCACTTC GTCTAGAGAA CATCTCCTTT ACTTATCAGC CAGGGACACC TTTTGAAAAA
ACTGCTTTGA GCGGGGTAAG CCTGATCATA AATGACGGTG ATTTCGTAGG TATTACCGGC
GAAAGCGGTT CCGGAAAATC CACCCTCTTG CAGGTTTTAA GCGGTTTACT ATTCCCTTTT
GCAGGTAAAC TCTGCTTGAA TACTGAAGTC ATCAATCCGG GTCAGAAGAA GTCGCTTAAT
CGGCTGCGTC GGAGAGTGGG ACTGGTATTC CAGTTTCCGG AGGAGCAAAT CTTCGAGCTC
CAGGTATATG ATGAAGTAGC TTTTGGCCCG CGCAACCTGG GTCTCTCCCG GAGTAAAGTG
GATGAGCGGG TACAGGAAGC CATGAATCAC ATGGGACTGG GCTTTGAAAA ATACAGCTTA
CGCCATTGTC ATAGCTTGAG CGGCGGTGAG AAGCGCCGCC TGGCCATTGC GGCGATTTTG
GCCATGCAAC CGCAAATCCT TCTTCTGGAT GAGCCTGCTG CCGGACTGGA CTATGAAGGA
CGGCAGGTTT TGTTGCAGCG CTTGGACTAT CTAAACCGGG AAAAGGGTAT CAGCATAGTT
ATGGTATCAC ATCATTATCA GCAGTTGCTG GCCTCTTGCT CTAGAATACT ACTTTTGGAT
AAAGGACGGC TCATTCTGGA TGGCATATCT TCTTCCTGGT TGGAATACTT GGATTTCCTG
ATGCAGCAGG GGTGGGAACT GACTGCCTCC CAGGAGTTGG TATATCTCTT GACGCAAAAA
GGATGGGAGT TTACTTCTTC TCCTCGCAGC CCCGAAGAAA CGGCCCGGGC AGTGGTAGAC
TTCATTCGCC GCTCCCGCCA GGATGGATAG
|
|---|
| Protein sequence | MSLRLENISF TYQPGTPFEK TALSGVSLII NDGDFVGITG ESGSGKSTLL QVLSGLLFPF
AGKLCLNTEV INPGQKKSLN RLRRRVGLVF QFPEEQIFEL QVYDEVAFGP RNLGLSRSKV
DERVQEAMNH MGLGFEKYSL RHCHSLSGGE KRRLAIAAIL AMQPQILLLD EPAAGLDYEG
RQVLLQRLDY LNREKGISIV MVSHHYQQLL ASCSRILLLD KGRLILDGIS SSWLEYLDFL
MQQGWELTAS QELVYLLTQK GWEFTSSPRS PEETARAVVD FIRRSRQDG
|
|---|
| |