| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_2295 |
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| Symbol | |
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| ID | 4283034 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008346 |
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| Strand | - |
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| Start bp | 2643844 |
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| End bp | 2644623 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638139176 |
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| Product | N-acetylmuramoyl-L-alanine amidase-like protein |
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| Protein accession | YP_754957 |
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| Protein GI | 114567803 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
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| TIGRFAM ID | [TIGR02883] N-acetylmuramoyl-L-alanine amidase CwlD |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000158579 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTACATAA GGAAACCATA CTTTTTTGCG GAAAAAAAGA CCGGCATATT ACTGCCTATG
TTTCTCTTCA TAATTCTTTC TTATGGGGTG GTAGCCAATG AATATCAACC TGCCGAGCCA
GTATTGTCCT ACAGCCTGGC CAACCAGCTT ATTGTAATTG ATCCTGGGCA TGGGGGTTTT
GACCCGGGGG CCTGGCGGGG CGAATTAATG GAAAAGAATA TTACTCTGCC CATAAGTAAA
AAGCTGCAAC AGCATTTAAG TCAGGCTGGG GCTATAGTTG TTATGTTACG AGAAGAGGAT
AAAGATCTGG CGGGAGAACA ATTCAAAGGC AGCCTGAAAG AGCGCAAGCG CCAGGATCTT
AAGGCTCGGG TCGATGAAGC TAACCGGCTC AAGGCCGACC TATATATCAG CATTCACACT
AATGCTGATC CCTCACCCCG CTGGTACGGG GCCCAGACTT TTTATAATGC GCATAGTGAA
GAGAGCAAAA TAATGGCAGA GTGCGTTCAG GACGAATTGA CCCGGATTTT GGGTAATACT
AAGCGTAAAG CCAAGCCTGG CAGCTATTAT ATTATTGATA AGACCGAAAT GCCGGCGGTA
ATTGTGGAGG TGGGTTTTTT GTCCCATCCG GCTGAGGCTA AGCTTCTAAA TGACCCGGCT
TATCAAAACA AGGTGGCCTA TGCTGTGTTT TCCGGTATAG TGAATTATCA GGCCAGTCAA
ATGGAGCCGG TGGATAAATC TGATAAAAAG ATAGTCACTG GTTCAGATAT AGCAAAATAG
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| Protein sequence | MYIRKPYFFA EKKTGILLPM FLFIILSYGV VANEYQPAEP VLSYSLANQL IVIDPGHGGF
DPGAWRGELM EKNITLPISK KLQQHLSQAG AIVVMLREED KDLAGEQFKG SLKERKRQDL
KARVDEANRL KADLYISIHT NADPSPRWYG AQTFYNAHSE ESKIMAECVQ DELTRILGNT
KRKAKPGSYY IIDKTEMPAV IVEVGFLSHP AEAKLLNDPA YQNKVAYAVF SGIVNYQASQ
MEPVDKSDKK IVTGSDIAK
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