| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_2256 |
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| Symbol | |
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| ID | 4283062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008346 |
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| Strand | - |
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| Start bp | 2597163 |
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| End bp | 2600348 |
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| Gene Length | 3186 bp |
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| Protein Length | 1061 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638139136 |
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| Product | type I restriction-modification system, R subunit |
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| Protein accession | YP_754918 |
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| Protein GI | 114567764 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0610] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
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| TIGRFAM ID | [TIGR00348] type I site-specific deoxyribonuclease, HsdR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCAGT ACAAAACACC TGAGTACATA AGGATCGACG AGCGTAACAG TGTAGAAAAA
CCTCTTCTCG ATCAGCTTGC AGGGCTTGGT TGGGAAATCA TCGACCTTGA CCGACAACAG
CTTCCAACGG ATAGCTATCG CGACGATTTT ACCAATGTAG TCATGCTACC GATTCTCCGA
GAACAACTTA CGGTTATCAA TCCCTGGTTG GAAGAGGATC AGATAGAAGA GGTAATTAAA
CAACTAACTG GCAGTTTTCC AGGAACAGGT CTGATTCAGA ATAACCGATA TGTATTTGAC
TTACTGTTGG AAAACACCAG TGTCAGCGAG AATCGCCATA CCGGAGAAAA AAGCCCCACG
GTACATTATA TCGACTTTGC AAACCGGGAT AATAACCGCT TTATTGCTGT TTGTCAGTTT
AAGGTCCGCA TACTGGGTAC TGAACATCAT ATTATCCCTG ATATTGTACT ATTCCTTAAT
GGATTACCGG TAGTAGCTAT CGAATGTAAA TCACCCAGGG TTAAAGACGC CATTCCCGAA
GCCATAGACC AGCTCATGCG CTACAGTGAA CAGCGAGGTG AAAAGGGTGA AGGTAGCGCA
CCGCTATTTT ACTATAATCA GATTATTATT GCGACCTGCC GTAATGAAGC CAAGTTTGGT
ACTATAACTA CACATAGTGA GAAATACTTT TATCGTTGGG CTGATCCTTA TCCCCGTACA
ATTGACGAAC TGGACCATGC AGGCAGCAGC CCTAATGACC AACAACGATT GGTAGCTGGT
ATGTTGGACC ACGATAATTT ACTCGATCTT ATACGTACCT TTACCCTCTT TTCCGCCAAC
GACAAAGGCG AAACCATAAA AATTATGGGA CGTTATCAGC AGTTCCGTGC TGTCAAACTA
GCTGTAAAAA GGCTATTGGA GGGAAAAACC CCGCGTGAAC GAAGCGGCAT AATCTGGCAT
ACTCAAGGCT CTGGAAAATC ATTAACTATG ATGTTCATGG TTCGCGAAAT GTATCGCCAT
ACTGAGCTTT CAAAATGGAA GGTGATTTTT GTCACCGACC GTACCCAACT GGAGGAACAG
CTATCCGAAA CCAGTCAAAG TATCGGATTT ACAGTTAAGG TAGCCGACAG CATCCGGAAT
TTAAAAACAC TTATGCGTTC CGATTCCTCT GATCTGGTTA TGGCTATGAT ACATAAGTTC
CGGGAAGCAG ATCTTACTGA GACCTTTCCG GAATTAAATA CTAGCCCATA TATTCTGGTA
ATGACTGATG AAGCTCACCG TTCTCAATAT GCCATGCTGG GAGCAAATCT CGATAAAGGC
ATACCTAACG CTGCCCGTAT TGGCTATACA GGTACCCCGA TTGATAAAAC TGAACGCGTA
TTCGGTGACT ACATAGATAA ATATACCATG AGACAGTCCA TTGAAGACGG TGTGACTTTG
GAGATTGTTT ATGAAGGTCG TACTCATAAT GCTGAAGTAA CAGATCAGGA AGAAATGGAT
GCTGCCTTTG AGGATGTTTT TAGTGATTAC AATCTTCAGC AAAGGCTGCA GATTTTAGGT
TATGGTTCCC GTGAAGCCTA CCTCGAAGCT GAGCCTACTA TCGCTGCTAA AGCGGAAGAC
ATGGTAGCTC ACTATCTTAC TCATGTATTC CCCAATGGGT TTAAAGCACA AATTGTTGCC
ACGTCACGTG AGGCAGCAGT ACGTTATAAG AAGTTCGTTG ATGCGGCTCT GTCTAACGCT
ATTATCGAAT TGGAAAACAA CAATCCTTTG AGACTTGATT TAGATAGACT CAGAAAGCTT
AAGACGGATG TCATTATATC CGGCAATCAT AACGACAAAA AGCATTTGAA AGTGTACTCA
GACAAGTCCA AGCATGAGGT TAGTATAAAG AGTTTTAAAT TATCTTTTGA TGCCGAAGAG
AACGGGGTTA CCGGTGACAT GGGTATTATC ATAGTTAATA ACATGCTGCT GACTGGCTTT
GATGCACCGG TCGAACAGGT GATGTATCTT GATAGGGTGA TCGTTGCTCA TAACCTCCTC
CAGGCTATCG CTCGCGTTAA TCGTGTAAGT GGCACTGGTA AGGATAAGGG GTATGTAGTT
GACTATGTTG GTATTGGTCA TCATTTAAGA AGGGCTATTG ATAACTACGA TGAAAGGGAG
CAAAAAGAGG TAATTGATAC CCTCAGTTTC CCCGAAGAAG AACTACGCGA TCTCGTTACC
AGTCATAAGG CTGTTATGGA ACTTATAAGC AATTATGGTC TTAAGGACCT ATCTGATTAT
GATGCGTTTT TTGATCTGTT TTATGACGAA GATGCCCGCT TTGACTTTAT GTTGGTATTC
AAACAGTTTA CACGGTGCCT GAACCTGGTG TTTCCTTCTC GCGAGGCCTT AAAATATATG
GCAGATTACC AGGCCCTTAA TGAAATTAAT GTTTTGGCCG CCAAACATTT TCGTGATGAG
CGCCTAAGTA TGAAAGACGT TCCTCCAAAG CTGCGCAGCA TTACCGACCA GTATCTGGAG
TCGAAAGGCA TTGATGTAAA GGTTAAACCT ATTTCCATTC TTGATGACGA CTTTGAAAAG
CAGGTCGGAA AACGAAATCG TGCCAAAACC AAAGCAGCTG AAGTGGAGCA TGCAATCCGG
CACCACCTTG ATATTGAACT GGACGATGAT CCTGACCTGC AAGCGTCCTT CTCTGCAGCA
CTAGCGGAGA TATTTCAACA GTTTCGTGAT AACTGGCAGA AAATATATGA GGAGTTAGAG
AAACTGCGAA TCCGTATTAT TAATGCGAGT AAGGAACCTA CCTATGGTCT TCACAGAAAG
AAGCAAATGC CATTTTTTAG GATGTTTAAT AAAGAAATAT TTGGTGCAGG TGATGCAGAC
CACGGCAAGA CGAAATTTGA GGCTGCAGAT GGAAAGGGTA CATATACTGT AAATGAAGAA
GACAAAATTA GCCTACTAGT GGATTTGACT CAAGAGGCGT TTTTTATTGT AGAACGTGAA
TTAAAACTTA CCGGGTTTTG GGGAAGTATC CCTGCCCGTA ACAAGTTAAA AGCGGAGTTG
CAACGAATGT TGTTGTCAGA AGAATACATA ATATTACCTA ATGTTGTAAA GAACCGTCAT
CATATTATCA GCCGAATAAT GGAAATAGCA GAAAAGAATA ACGACATAAT TTTGTACGCG
GAGTGA
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| Protein sequence | MSQYKTPEYI RIDERNSVEK PLLDQLAGLG WEIIDLDRQQ LPTDSYRDDF TNVVMLPILR
EQLTVINPWL EEDQIEEVIK QLTGSFPGTG LIQNNRYVFD LLLENTSVSE NRHTGEKSPT
VHYIDFANRD NNRFIAVCQF KVRILGTEHH IIPDIVLFLN GLPVVAIECK SPRVKDAIPE
AIDQLMRYSE QRGEKGEGSA PLFYYNQIII ATCRNEAKFG TITTHSEKYF YRWADPYPRT
IDELDHAGSS PNDQQRLVAG MLDHDNLLDL IRTFTLFSAN DKGETIKIMG RYQQFRAVKL
AVKRLLEGKT PRERSGIIWH TQGSGKSLTM MFMVREMYRH TELSKWKVIF VTDRTQLEEQ
LSETSQSIGF TVKVADSIRN LKTLMRSDSS DLVMAMIHKF READLTETFP ELNTSPYILV
MTDEAHRSQY AMLGANLDKG IPNAARIGYT GTPIDKTERV FGDYIDKYTM RQSIEDGVTL
EIVYEGRTHN AEVTDQEEMD AAFEDVFSDY NLQQRLQILG YGSREAYLEA EPTIAAKAED
MVAHYLTHVF PNGFKAQIVA TSREAAVRYK KFVDAALSNA IIELENNNPL RLDLDRLRKL
KTDVIISGNH NDKKHLKVYS DKSKHEVSIK SFKLSFDAEE NGVTGDMGII IVNNMLLTGF
DAPVEQVMYL DRVIVAHNLL QAIARVNRVS GTGKDKGYVV DYVGIGHHLR RAIDNYDERE
QKEVIDTLSF PEEELRDLVT SHKAVMELIS NYGLKDLSDY DAFFDLFYDE DARFDFMLVF
KQFTRCLNLV FPSREALKYM ADYQALNEIN VLAAKHFRDE RLSMKDVPPK LRSITDQYLE
SKGIDVKVKP ISILDDDFEK QVGKRNRAKT KAAEVEHAIR HHLDIELDDD PDLQASFSAA
LAEIFQQFRD NWQKIYEELE KLRIRIINAS KEPTYGLHRK KQMPFFRMFN KEIFGAGDAD
HGKTKFEAAD GKGTYTVNEE DKISLLVDLT QEAFFIVERE LKLTGFWGSI PARNKLKAEL
QRMLLSEEYI ILPNVVKNRH HIISRIMEIA EKNNDIILYA E
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