Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_2230 |
Symbol | |
ID | 4283071 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | + |
Start bp | 2567213 |
End bp | 2569360 |
Gene Length | 2148 bp |
Protein Length | 715 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638139110 |
Product | hypothetical protein |
Protein accession | YP_754892 |
Protein GI | 114567738 |
COG category | [V] Defense mechanisms |
COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTGAAA TTGCCAAAGT CCCTGTAGTT ATGCAAATGG AAGCTTTAGA GTGCGGTGCC GCCAGTCTGG CCATGATACT GGCTTTTCAT GGCAAATGGG TTCCGTTGGA ACGAGTGCGG AGCGACTGCG GAGTATCCCG CGATGGCAGC AATGCCGTAA ACATCCTGCG GGCGGCGCGT GCCTACGGCA TGGGAGCCTC AGGGTATCGT CTGGAACTTG ACGATGTCAA ACAGATAGAA TATCCGGTGA TAATACACTG GAACTTTAAT CATTTCGTAG TGTTAAACGG ATTTAAGAAA AACTATGCGG TGTTAAATGA TCCCGGACGG GGAACGGTTG AGGTACCCAT GGAAGAGTTT AATAAATCCT TTACCGGCAT TGTGCTTACT TTTTCTAAAA CAGCTGATTT TGTGGCCGAC GGCCAGCCGC GCAGCGTACT CGATTTTGCC AAAGGCCGTT TAAAAGGCAC TCTGGTGCCG ATATTATTCG TAATTCTCAC CGGTATTCTG ACCGCCGTGA CGGGGGTTAT GACCCCGGTT TTTGCCCGGG TGTTTATGGA CCGAATTTTA ACCGGGGCCA ATCCTGATTG GCTTTATCCC TTTATATTGG CCATGAGTGG CTTGCTCGCT TTTCAGATCA TAGTATCTCT TATCAACACC CTGTACATGC TAAAAATCAG AGGCAAACTG GCTATTGTGG CCAACACCAC CTTCTTCTGG CATGTCCTGC GCCTGCCGAT GGAGTTTTTT TCGCAGCGCA TGGCCGGGGA TATTGCCGCC CGGCAGAGTT CCAACGAGCT TATCGCCGAA ACCTTGATAA GCCAACTGGC CCCGGTCCTG TTAAACCTGG CCATGCTGGT TTTTTATCTG GTGGTTATGA TAAAATACAG CCTTTTGCTG ACTGCTGTAG GACTTGCGTC TACCTTCATC AATATGTGGG TAGCCCGTAT TATTTCAAAG AAACGGGTGA ATATAACCCG GGCTCAGATG CGCGACAGCG GTAAACTGGC AGCCACCACC ATGAGCGGGA TTGAAATGAT TGAAACCATA AAAGCATCCG GGGCGGAAAA TGGTTATTTT GAACGCTGGG CCGGTTTCCA GGCTTCGGTC AACAGTTCAT CGGTCAGGTT TGCCCTGCTC AATCAGTACC TGGGAGCGGT TCCCGGTGCC CTGCAGCAGA TTGCTAATCT GGCCGTGCTG GTGCTGGGGG TGATGCTGAT CATGAACGGC AAGTTTACGG TAGGTATGCT CCTGGCCTTT CAGGGTTTCA TGGCCTCATT TTTAGCGCCT GTGAATGCCT TTATCGGGCT GGGACAGAAT ATGCAGGAAA TGCGTTCTTC CATGGAGAGG ATCGAAGATG TGATGAATTA CCAGCCCGAT GTGGAGTACC TGCCCCAGGC TAAGGACGAT GACCGGGGGT ACCACAAATT GAGCGGGGCT CTTACCATGA AAAACGTTAC CTTTGGCTAT TCCCGGCTGG CAAAACCCTT GATTAAAAAC TTCAACCTTA CTGTCCAACC GGGCCAGAGA ATTGCCCTGG TAGGCACCTC AGGGTGCGGA AAATCCACCC TCTCCAAATT GATTTCCGGT CTGTACCGGC CCTGGAGCGG TGTGATCGAG TTTGACGGCC AGGCCCGGGA AGACATCTTC CCGGAGGTTT TTACCGGATC GGTGGCGGTA GTCGATCAGG ACATTATCCT GTTTGAGGAT ACCATTTGCA ATAACATAAA GATGTGGGAT AAATCTATTG AAGACTTTGA AATGATTTTA GCCGCCCGCG ACGCCGGGCT GCATACGGAA ATAATGCAGC GGGAGGGCGG CTACAATGGC ATGGTCCTGG AGGGAGGCCG AAATTTCTCG GGCGGGCAGC GGCAGAGGAT GGAGATAGCC CGGGTGCTGG CCCAGGACCC CAGGATTGTC ATTCTGGACG AGGCCACCTC AGCCCTGGAT GCCAAAACCG AGTATGAAGT TATACAAGCT ATCAAGGACC GGGGCGTAAC CTGCATTATT ATAGCCCATC GGCTGTCCAC CATTCGCGAC TGTGATGAAA TTATCGTGAT GAATAAGGGC AAAGTGGTCG AGCGGGGCCG ACATGAAGAA CTATACCAAG CCGGGGGCCT TTATACCGAG CTTATTGCCA CTGAATAG
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Protein sequence | MPEIAKVPVV MQMEALECGA ASLAMILAFH GKWVPLERVR SDCGVSRDGS NAVNILRAAR AYGMGASGYR LELDDVKQIE YPVIIHWNFN HFVVLNGFKK NYAVLNDPGR GTVEVPMEEF NKSFTGIVLT FSKTADFVAD GQPRSVLDFA KGRLKGTLVP ILFVILTGIL TAVTGVMTPV FARVFMDRIL TGANPDWLYP FILAMSGLLA FQIIVSLINT LYMLKIRGKL AIVANTTFFW HVLRLPMEFF SQRMAGDIAA RQSSNELIAE TLISQLAPVL LNLAMLVFYL VVMIKYSLLL TAVGLASTFI NMWVARIISK KRVNITRAQM RDSGKLAATT MSGIEMIETI KASGAENGYF ERWAGFQASV NSSSVRFALL NQYLGAVPGA LQQIANLAVL VLGVMLIMNG KFTVGMLLAF QGFMASFLAP VNAFIGLGQN MQEMRSSMER IEDVMNYQPD VEYLPQAKDD DRGYHKLSGA LTMKNVTFGY SRLAKPLIKN FNLTVQPGQR IALVGTSGCG KSTLSKLISG LYRPWSGVIE FDGQAREDIF PEVFTGSVAV VDQDIILFED TICNNIKMWD KSIEDFEMIL AARDAGLHTE IMQREGGYNG MVLEGGRNFS GGQRQRMEIA RVLAQDPRIV ILDEATSALD AKTEYEVIQA IKDRGVTCII IAHRLSTIRD CDEIIVMNKG KVVERGRHEE LYQAGGLYTE LIATE
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