Gene Swol_2230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_2230 
Symbol 
ID4283071 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp2567213 
End bp2569360 
Gene Length2148 bp 
Protein Length715 aa 
Translation table11 
GC content51% 
IMG OID638139110 
Producthypothetical protein 
Protein accessionYP_754892 
Protein GI114567738 
COG category[V] Defense mechanisms 
COG ID[COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTGAAA TTGCCAAAGT CCCTGTAGTT ATGCAAATGG AAGCTTTAGA GTGCGGTGCC 
GCCAGTCTGG CCATGATACT GGCTTTTCAT GGCAAATGGG TTCCGTTGGA ACGAGTGCGG
AGCGACTGCG GAGTATCCCG CGATGGCAGC AATGCCGTAA ACATCCTGCG GGCGGCGCGT
GCCTACGGCA TGGGAGCCTC AGGGTATCGT CTGGAACTTG ACGATGTCAA ACAGATAGAA
TATCCGGTGA TAATACACTG GAACTTTAAT CATTTCGTAG TGTTAAACGG ATTTAAGAAA
AACTATGCGG TGTTAAATGA TCCCGGACGG GGAACGGTTG AGGTACCCAT GGAAGAGTTT
AATAAATCCT TTACCGGCAT TGTGCTTACT TTTTCTAAAA CAGCTGATTT TGTGGCCGAC
GGCCAGCCGC GCAGCGTACT CGATTTTGCC AAAGGCCGTT TAAAAGGCAC TCTGGTGCCG
ATATTATTCG TAATTCTCAC CGGTATTCTG ACCGCCGTGA CGGGGGTTAT GACCCCGGTT
TTTGCCCGGG TGTTTATGGA CCGAATTTTA ACCGGGGCCA ATCCTGATTG GCTTTATCCC
TTTATATTGG CCATGAGTGG CTTGCTCGCT TTTCAGATCA TAGTATCTCT TATCAACACC
CTGTACATGC TAAAAATCAG AGGCAAACTG GCTATTGTGG CCAACACCAC CTTCTTCTGG
CATGTCCTGC GCCTGCCGAT GGAGTTTTTT TCGCAGCGCA TGGCCGGGGA TATTGCCGCC
CGGCAGAGTT CCAACGAGCT TATCGCCGAA ACCTTGATAA GCCAACTGGC CCCGGTCCTG
TTAAACCTGG CCATGCTGGT TTTTTATCTG GTGGTTATGA TAAAATACAG CCTTTTGCTG
ACTGCTGTAG GACTTGCGTC TACCTTCATC AATATGTGGG TAGCCCGTAT TATTTCAAAG
AAACGGGTGA ATATAACCCG GGCTCAGATG CGCGACAGCG GTAAACTGGC AGCCACCACC
ATGAGCGGGA TTGAAATGAT TGAAACCATA AAAGCATCCG GGGCGGAAAA TGGTTATTTT
GAACGCTGGG CCGGTTTCCA GGCTTCGGTC AACAGTTCAT CGGTCAGGTT TGCCCTGCTC
AATCAGTACC TGGGAGCGGT TCCCGGTGCC CTGCAGCAGA TTGCTAATCT GGCCGTGCTG
GTGCTGGGGG TGATGCTGAT CATGAACGGC AAGTTTACGG TAGGTATGCT CCTGGCCTTT
CAGGGTTTCA TGGCCTCATT TTTAGCGCCT GTGAATGCCT TTATCGGGCT GGGACAGAAT
ATGCAGGAAA TGCGTTCTTC CATGGAGAGG ATCGAAGATG TGATGAATTA CCAGCCCGAT
GTGGAGTACC TGCCCCAGGC TAAGGACGAT GACCGGGGGT ACCACAAATT GAGCGGGGCT
CTTACCATGA AAAACGTTAC CTTTGGCTAT TCCCGGCTGG CAAAACCCTT GATTAAAAAC
TTCAACCTTA CTGTCCAACC GGGCCAGAGA ATTGCCCTGG TAGGCACCTC AGGGTGCGGA
AAATCCACCC TCTCCAAATT GATTTCCGGT CTGTACCGGC CCTGGAGCGG TGTGATCGAG
TTTGACGGCC AGGCCCGGGA AGACATCTTC CCGGAGGTTT TTACCGGATC GGTGGCGGTA
GTCGATCAGG ACATTATCCT GTTTGAGGAT ACCATTTGCA ATAACATAAA GATGTGGGAT
AAATCTATTG AAGACTTTGA AATGATTTTA GCCGCCCGCG ACGCCGGGCT GCATACGGAA
ATAATGCAGC GGGAGGGCGG CTACAATGGC ATGGTCCTGG AGGGAGGCCG AAATTTCTCG
GGCGGGCAGC GGCAGAGGAT GGAGATAGCC CGGGTGCTGG CCCAGGACCC CAGGATTGTC
ATTCTGGACG AGGCCACCTC AGCCCTGGAT GCCAAAACCG AGTATGAAGT TATACAAGCT
ATCAAGGACC GGGGCGTAAC CTGCATTATT ATAGCCCATC GGCTGTCCAC CATTCGCGAC
TGTGATGAAA TTATCGTGAT GAATAAGGGC AAAGTGGTCG AGCGGGGCCG ACATGAAGAA
CTATACCAAG CCGGGGGCCT TTATACCGAG CTTATTGCCA CTGAATAG
 
Protein sequence
MPEIAKVPVV MQMEALECGA ASLAMILAFH GKWVPLERVR SDCGVSRDGS NAVNILRAAR 
AYGMGASGYR LELDDVKQIE YPVIIHWNFN HFVVLNGFKK NYAVLNDPGR GTVEVPMEEF
NKSFTGIVLT FSKTADFVAD GQPRSVLDFA KGRLKGTLVP ILFVILTGIL TAVTGVMTPV
FARVFMDRIL TGANPDWLYP FILAMSGLLA FQIIVSLINT LYMLKIRGKL AIVANTTFFW
HVLRLPMEFF SQRMAGDIAA RQSSNELIAE TLISQLAPVL LNLAMLVFYL VVMIKYSLLL
TAVGLASTFI NMWVARIISK KRVNITRAQM RDSGKLAATT MSGIEMIETI KASGAENGYF
ERWAGFQASV NSSSVRFALL NQYLGAVPGA LQQIANLAVL VLGVMLIMNG KFTVGMLLAF
QGFMASFLAP VNAFIGLGQN MQEMRSSMER IEDVMNYQPD VEYLPQAKDD DRGYHKLSGA
LTMKNVTFGY SRLAKPLIKN FNLTVQPGQR IALVGTSGCG KSTLSKLISG LYRPWSGVIE
FDGQAREDIF PEVFTGSVAV VDQDIILFED TICNNIKMWD KSIEDFEMIL AARDAGLHTE
IMQREGGYNG MVLEGGRNFS GGQRQRMEIA RVLAQDPRIV ILDEATSALD AKTEYEVIQA
IKDRGVTCII IAHRLSTIRD CDEIIVMNKG KVVERGRHEE LYQAGGLYTE LIATE