Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_2199 |
Symbol | |
ID | 4283110 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | + |
Start bp | 2537433 |
End bp | 2538110 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638139079 |
Product | HK97 family portal protein , putative |
Protein accession | YP_754861 |
Protein GI | 114567707 |
COG category | [S] Function unknown |
COG ID | [COG4695] Phage-related protein |
TIGRFAM ID | [TIGR01537] phage portal protein, HK97 family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGGGTTAT TTACAAACCT ATTTAAAGCA AGAGATAAAC CAAAAAACAG GACACCAGGC AGCAGCTATA GCTTCTTCTT TGGTGGAACT ACAAGTGGCA AGCCGGTAAA TGAACATACC GCCATGCAAA TGACAGCAGT TTACTCTTGT GTAAGGATAC TGGCTGAAGC GGTAGCGGGA CTCCCTCTTC ATTTATATAA ATACACTACA AGCGGCGGCA AGGAGAAAGC ACTCTCCCAC CCGCTGTATT TTTTACTCCA CGATGAGCCT AACCCCGAGA TGAGTTCCTT TGTTTTTCGC GAAACTTTAA TGACTCATCT TCTGTTGTGG GGGAACGCCT ATGCCCAGAT TATTAGAAAC GGAAAGGGTG AAGTCATTGC CTTATATCCT TTGATGCCAA ACCGGATGAG AGTTGACCGT GATTCCAAGG GAGAACTTTA CTACTCCTAC ACCCGCTACT CAGATGAAGC ACCGACCATA AACGGAATGA CTGTTACCTT AAGACCCAGC GATGTACTGC ATATTCCCGG CTTGGGCTTT GACGGTCTAG TGGGGTATTC CCCCATTGCC ATGGCTAAAA ACGCAATCGG GCTTGCGATG GCAACTGAAG AATATGGCGC CAAGTTTTTT GCTAACGGTG TTTATGGCAC AATAAAAATA CAGCGAATGG CAAGTTAA
|
Protein sequence | MGLFTNLFKA RDKPKNRTPG SSYSFFFGGT TSGKPVNEHT AMQMTAVYSC VRILAEAVAG LPLHLYKYTT SGGKEKALSH PLYFLLHDEP NPEMSSFVFR ETLMTHLLLW GNAYAQIIRN GKGEVIALYP LMPNRMRVDR DSKGELYYSY TRYSDEAPTI NGMTVTLRPS DVLHIPGLGF DGLVGYSPIA MAKNAIGLAM ATEEYGAKFF ANGVYGTIKI QRMAS
|
| |