Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_2180 |
Symbol | |
ID | 4283126 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | + |
Start bp | 2516153 |
End bp | 2517988 |
Gene Length | 1836 bp |
Protein Length | 611 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638139060 |
Product | hypothetical protein |
Protein accession | YP_754842 |
Protein GI | 114567688 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG5337] Spore coat assembly protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.522979 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCGGTGA GAGCAATGAT AACGAGTAAA TACCTGAATA CCCTGGTGCT AATACTGATG TCACTTGCTG TTCTGGCTGC GAGTTTCCTG ACGCTGTACC CCCACCATCC GGATAGCGCT GCCCCAGCCG AGCCTGAATA TGCCAGTAAG CTTTTTAATA AAGAGCAAAT CATGGAGATT AATATTGAAA TGGAGCCGGA GGATTTTGAC TGGATTATAG AAAATGCTAC CCGGGAAGAA TACCGGCAAG CGGATATTAC TATAAACGGC AATACTTATC ACAATGTAGG CATCAGGCCC AAAGGCAACT CCAGTTTGAG AATGGTGGCG CAGGATAAAA ACAGTGATCG TTTCAGCTTC AAGGTCAAAT TTGATGCCTA TGTCGAAGGG CAAGCGTGTA TGGGCTTGAA CAAGCTGGCT TTAAATAACA TTATTATGGA TAAAACCTAC ATGAAAGAGT ACCTGGCCTA TGAAATCTTT GACTATATGG GAGTTGTCAC CCCTAAATAT GCCTATGCCA ATATAAGCAT TAACAGCAAA CCCTGGGGCC TGTACCTGGC AGTGGAGGCT ATGGAAGAGA GTTTTGTCAA GCGTAATTAT GGCAGCCTGG AAGGGCATCT ATATCGCCCG GAGGGGGCCG GTTCCGATTT GAAATGGGCC GGGGAAGATG CCGCCAACTA TACCGGCATC AGAAAGATGG CGGCCTATAA TGTCACCGAC AGCGATTTTA AAAAGATTAT TACCATGATT GAGCAACTGA ATAATGGAAG TGAGCTGGAA AAGTATCTGG ATATCGATTC CATATTGCGA TACTTTGCCG TAAATAGCTT TTTGGTTAAC TTTGACAGTT ATGTCGGCAG CCTGAAACAC AACTATTACT TGTATGAAGA AAACGGGGTA TGCACTATTC TGCCCTGGGA CTTCAACCTG GCCTTTGCCG GGCATGAGAT AAGCAGCGCC CAGAAAGCTG TGAACTTCCC CATCGATACA CCGCTTACCG TTAATCTGAG CGAGCGCCCC CTGATTGGCA AACTGCTAGA AATACCCGAG TACCGCGAGC TGTACCATAA ATATTTGCAG CAGTTGACCG AAGACTATAT TAACAGCGGC CGCTTCGAAG ATAGCGTAGA AAAACTGGAT AAAATGATTA ACAGCTCGGT GAAAAATGAC GCCACGGCTT TCTACAGCCA TGCGGAATAT GAGAAATCGC TCCCGGTATT GGTAGAGTTT GCCCGCCTGC GGGCCCAGAG CATCCAGGCT CAGCTATCCG GTGAACAAGC AGCCACGGCA ACAGGGCAAA ATGAAAACAG CACCCCCAAT ATTGACGCCA GCGGCATTGA TTTAAGCGCC CTGGGAGGTA TGGGCGGCGA CAGAGGGGGC GGAGCCCGGC CCGCTGATGG CGGCGGAGCC GCCATACCTG GTATGGTTAA ACCTGAGGGG GAAACCTCGA AAGAGCCAGG TGCTCCCCCG GAAGGTCCGG GTGTTTTCCC CAGAGGAAAC AGGCCCGACC CGGAAACTAT GATGAAGGCT TTTGAAATTA TGCGGGAGGC CGAAGGCGGC CAATTATCCA CGGCCCAGAT AGCCCGGCTC CAAGAATTGG GCCTGGACGA CAACATGATA GATAGGATGA GAAATAGGCC CGCGGCCATG GAGGGGCGAA ATGAATGGGC TCCTCCCGGG GATAGAGCCA ATGGTCCAGA CGGCCCCTTC GGAGGTAGAG CTTTAAGCAG CAGAATTACT AGCACAGAAA TAGCCTATGT GGCTGTCGCA ACATTAAGTA TTCTGCTTGG CTTGTTATTT GTCTGGAAAT ACAAAAGAAG AAAGTATTCC AGTTAG
|
Protein sequence | MAVRAMITSK YLNTLVLILM SLAVLAASFL TLYPHHPDSA APAEPEYASK LFNKEQIMEI NIEMEPEDFD WIIENATREE YRQADITING NTYHNVGIRP KGNSSLRMVA QDKNSDRFSF KVKFDAYVEG QACMGLNKLA LNNIIMDKTY MKEYLAYEIF DYMGVVTPKY AYANISINSK PWGLYLAVEA MEESFVKRNY GSLEGHLYRP EGAGSDLKWA GEDAANYTGI RKMAAYNVTD SDFKKIITMI EQLNNGSELE KYLDIDSILR YFAVNSFLVN FDSYVGSLKH NYYLYEENGV CTILPWDFNL AFAGHEISSA QKAVNFPIDT PLTVNLSERP LIGKLLEIPE YRELYHKYLQ QLTEDYINSG RFEDSVEKLD KMINSSVKND ATAFYSHAEY EKSLPVLVEF ARLRAQSIQA QLSGEQAATA TGQNENSTPN IDASGIDLSA LGGMGGDRGG GARPADGGGA AIPGMVKPEG ETSKEPGAPP EGPGVFPRGN RPDPETMMKA FEIMREAEGG QLSTAQIARL QELGLDDNMI DRMRNRPAAM EGRNEWAPPG DRANGPDGPF GGRALSSRIT STEIAYVAVA TLSILLGLLF VWKYKRRKYS S
|
| |