Gene Swol_2180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_2180 
Symbol 
ID4283126 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp2516153 
End bp2517988 
Gene Length1836 bp 
Protein Length611 aa 
Translation table11 
GC content49% 
IMG OID638139060 
Producthypothetical protein 
Protein accessionYP_754842 
Protein GI114567688 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG5337] Spore coat assembly protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.522979 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGTGA GAGCAATGAT AACGAGTAAA TACCTGAATA CCCTGGTGCT AATACTGATG 
TCACTTGCTG TTCTGGCTGC GAGTTTCCTG ACGCTGTACC CCCACCATCC GGATAGCGCT
GCCCCAGCCG AGCCTGAATA TGCCAGTAAG CTTTTTAATA AAGAGCAAAT CATGGAGATT
AATATTGAAA TGGAGCCGGA GGATTTTGAC TGGATTATAG AAAATGCTAC CCGGGAAGAA
TACCGGCAAG CGGATATTAC TATAAACGGC AATACTTATC ACAATGTAGG CATCAGGCCC
AAAGGCAACT CCAGTTTGAG AATGGTGGCG CAGGATAAAA ACAGTGATCG TTTCAGCTTC
AAGGTCAAAT TTGATGCCTA TGTCGAAGGG CAAGCGTGTA TGGGCTTGAA CAAGCTGGCT
TTAAATAACA TTATTATGGA TAAAACCTAC ATGAAAGAGT ACCTGGCCTA TGAAATCTTT
GACTATATGG GAGTTGTCAC CCCTAAATAT GCCTATGCCA ATATAAGCAT TAACAGCAAA
CCCTGGGGCC TGTACCTGGC AGTGGAGGCT ATGGAAGAGA GTTTTGTCAA GCGTAATTAT
GGCAGCCTGG AAGGGCATCT ATATCGCCCG GAGGGGGCCG GTTCCGATTT GAAATGGGCC
GGGGAAGATG CCGCCAACTA TACCGGCATC AGAAAGATGG CGGCCTATAA TGTCACCGAC
AGCGATTTTA AAAAGATTAT TACCATGATT GAGCAACTGA ATAATGGAAG TGAGCTGGAA
AAGTATCTGG ATATCGATTC CATATTGCGA TACTTTGCCG TAAATAGCTT TTTGGTTAAC
TTTGACAGTT ATGTCGGCAG CCTGAAACAC AACTATTACT TGTATGAAGA AAACGGGGTA
TGCACTATTC TGCCCTGGGA CTTCAACCTG GCCTTTGCCG GGCATGAGAT AAGCAGCGCC
CAGAAAGCTG TGAACTTCCC CATCGATACA CCGCTTACCG TTAATCTGAG CGAGCGCCCC
CTGATTGGCA AACTGCTAGA AATACCCGAG TACCGCGAGC TGTACCATAA ATATTTGCAG
CAGTTGACCG AAGACTATAT TAACAGCGGC CGCTTCGAAG ATAGCGTAGA AAAACTGGAT
AAAATGATTA ACAGCTCGGT GAAAAATGAC GCCACGGCTT TCTACAGCCA TGCGGAATAT
GAGAAATCGC TCCCGGTATT GGTAGAGTTT GCCCGCCTGC GGGCCCAGAG CATCCAGGCT
CAGCTATCCG GTGAACAAGC AGCCACGGCA ACAGGGCAAA ATGAAAACAG CACCCCCAAT
ATTGACGCCA GCGGCATTGA TTTAAGCGCC CTGGGAGGTA TGGGCGGCGA CAGAGGGGGC
GGAGCCCGGC CCGCTGATGG CGGCGGAGCC GCCATACCTG GTATGGTTAA ACCTGAGGGG
GAAACCTCGA AAGAGCCAGG TGCTCCCCCG GAAGGTCCGG GTGTTTTCCC CAGAGGAAAC
AGGCCCGACC CGGAAACTAT GATGAAGGCT TTTGAAATTA TGCGGGAGGC CGAAGGCGGC
CAATTATCCA CGGCCCAGAT AGCCCGGCTC CAAGAATTGG GCCTGGACGA CAACATGATA
GATAGGATGA GAAATAGGCC CGCGGCCATG GAGGGGCGAA ATGAATGGGC TCCTCCCGGG
GATAGAGCCA ATGGTCCAGA CGGCCCCTTC GGAGGTAGAG CTTTAAGCAG CAGAATTACT
AGCACAGAAA TAGCCTATGT GGCTGTCGCA ACATTAAGTA TTCTGCTTGG CTTGTTATTT
GTCTGGAAAT ACAAAAGAAG AAAGTATTCC AGTTAG
 
Protein sequence
MAVRAMITSK YLNTLVLILM SLAVLAASFL TLYPHHPDSA APAEPEYASK LFNKEQIMEI 
NIEMEPEDFD WIIENATREE YRQADITING NTYHNVGIRP KGNSSLRMVA QDKNSDRFSF
KVKFDAYVEG QACMGLNKLA LNNIIMDKTY MKEYLAYEIF DYMGVVTPKY AYANISINSK
PWGLYLAVEA MEESFVKRNY GSLEGHLYRP EGAGSDLKWA GEDAANYTGI RKMAAYNVTD
SDFKKIITMI EQLNNGSELE KYLDIDSILR YFAVNSFLVN FDSYVGSLKH NYYLYEENGV
CTILPWDFNL AFAGHEISSA QKAVNFPIDT PLTVNLSERP LIGKLLEIPE YRELYHKYLQ
QLTEDYINSG RFEDSVEKLD KMINSSVKND ATAFYSHAEY EKSLPVLVEF ARLRAQSIQA
QLSGEQAATA TGQNENSTPN IDASGIDLSA LGGMGGDRGG GARPADGGGA AIPGMVKPEG
ETSKEPGAPP EGPGVFPRGN RPDPETMMKA FEIMREAEGG QLSTAQIARL QELGLDDNMI
DRMRNRPAAM EGRNEWAPPG DRANGPDGPF GGRALSSRIT STEIAYVAVA TLSILLGLLF
VWKYKRRKYS S