Gene Swol_2176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_2176 
Symbol 
ID4283122 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp2512507 
End bp2513709 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content46% 
IMG OID638139056 
Producthypothetical protein 
Protein accessionYP_754838 
Protein GI114567684 
COG category[T] Signal transduction mechanisms 
COG ID[COG5002] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.01831 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTTGCTA AGCTTAGAAA AAAATTTGTT ATCATTAATA TGTCGCTGCT GACCATAGTA 
TTTTTAGTCA TCTTCAGCGT TATTTACCTC TTAACCGCGG TGGCCGGAGA ACGACAAACA
GAGTTTGCCC TGAACACTAT AATGTTCGCT CCCCCTCGTC CTTTTCCGGA TAATCCTATT
CTGGCCAGCA GTATGGTGGC TGAATTGGAT GAAAAGGGCC ATATGGTGAG AAGTTTTTCC
TTCATGAATA TGAGTCAGCA GATAATTGGC CAGGCAGTTG AGCAGGCGGT GCAAAGCCGG
GATTTGTCAG GCAAAATCCG GATTGAGGAG AGCTATTACG CTTTTCTGAA GCATAATACC
GGCAACGGGA CCAGGATAGT TTTTGTGGAT CGGACTCCCC AGCACCGGAT GCTGATGAAT
CTATTGCTGA CTTTTCTGCT GGTGGGCAGT ATCAGCCTGC TGCTGCTTTT CCTGATCAGC
ATCTACCTGG CCGATAAATC CATCCAACCC ATTCAAGAGG CATTTGAAAA ACAAAGGCAA
TTTATTGCCG ATGCTTCCCA CGAGCTCAGA ACCCCGCTGG CCGTAATAAA AACCAATCTG
GCCTTGATAA CCGCCAACAG CGAAGAAAGC GTTGAAAGCC AGTCCCGGTG GATTGACTAT
ATCTCTTCCC AGACGGATAG TATGGCCAAC CTGGTCGATG ATATGCTGGC CCTCGCCCGA
ATTGATTATA TGAAAGCGAA AACTCTTTTC ACCCGGTTTG ATTTAAGCCA GACTTTAAGC
AGCACTCTCC TGGCTTTTGA AGCTATTTTT TATGAAAAGC ATATAAGCCT GAAGCAAGAA
ATTCAAGAAG ATATTTTCCT CAATGGGGAG AAGGAGAACA TAAAGAAAGT CATCAGCATC
TTGATTGATA ACGCCATAAA GAATACCGGG GCCAACGGGA GTATTACCGT TCGGCTGGCC
AGTGACAAAA ATAAAATAGA GATGCGGATA AGCAACACGG GTGAAGGGAT TCCGGCTGAA
GATCTGCAAA AAATATTCGA ACGCTTTTAC CGGGTGGATA AATCCCGGAG CCGGGAAAAC
AGGGGTTATG GTTTAGGACT GGCTATTGCG AAATCAATTA TAGAACAACA GCAGGGAAGG
ATTTATGCTA CCAGCACTCC GGGGGCAGAT ACATCTTTTG TGGTGGAATG GCCCAGGACT
TAA
 
Protein sequence
MFAKLRKKFV IINMSLLTIV FLVIFSVIYL LTAVAGERQT EFALNTIMFA PPRPFPDNPI 
LASSMVAELD EKGHMVRSFS FMNMSQQIIG QAVEQAVQSR DLSGKIRIEE SYYAFLKHNT
GNGTRIVFVD RTPQHRMLMN LLLTFLLVGS ISLLLLFLIS IYLADKSIQP IQEAFEKQRQ
FIADASHELR TPLAVIKTNL ALITANSEES VESQSRWIDY ISSQTDSMAN LVDDMLALAR
IDYMKAKTLF TRFDLSQTLS STLLAFEAIF YEKHISLKQE IQEDIFLNGE KENIKKVISI
LIDNAIKNTG ANGSITVRLA SDKNKIEMRI SNTGEGIPAE DLQKIFERFY RVDKSRSREN
RGYGLGLAIA KSIIEQQQGR IYATSTPGAD TSFVVEWPRT