Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_2148 |
Symbol | |
ID | 4283164 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | - |
Start bp | 2469021 |
End bp | 2469899 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638139028 |
Product | branched-chain amino acid aminotransferase |
Protein accession | YP_754810 |
Protein GI | 114567656 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
TIGRFAM ID | [TIGR01121] D-amino acid aminotransferase [TIGR01122] branched-chain amino acid aminotransferase, group I |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGATTAA AGATTTACCT CGATGGAAAG TTTGTGGATG AGGAGGAGGC CAAGGTATCG GTTTTTGACC ACGGTTTTCT TTATGGTGAC GGCGTATTTG AAGGAATCAG GGCCTATCAT AACAGTGTAT TCCGCTTAAA GGATCATGTT GATCGCCTTT ATGATTCAGC CAAAGCCGTA AATATGGAGA TTCCGGTGAA CAAGGAACAA ATGTCGGAAA TAATCCTAGA AAGCTGCCGC CAAAACGACT TAAAGGATGC TTATATCCGG GTGGTTGTTT CCCGGGGCAA AGGCGACCTG GGTCTTGATC CCCGTAAGTG CTCGGTCCCC ACGGTCGTAT GTATTGCGTC TTCGATAAGC ATCTATCCGG AGGAGATGTA TGAGAAGGGT CTGGATGTCA TTACCGTACC TACCCGCCGG AATGGCCCGG AAGGGGTTAA TCCGCGTATC AAATCACTAA ATTATCTTAA TAATATTATG GCCAAAATAG AAGCCAATAT GGCGGGTGTG CCTGAGGCCA TTCTGCTTAA CCAGGAAGGC TATGTAGCTG AATGTACTGG AGATAATATT TTTATGGTAA AAAACGGGAT ACTTAAAACC CCGGCCATTC ATCTGGGCCT CTTGGAAGGA GTAACCCGCA ACGAAGTAAT TGCTATAGCC CGAAAAGAAG GTATTGATGT GCAGGAAACC ACCTTTACCC GCTATGACCT TTTTGTAGCG GATGAGGTAT TTTTGACCGG TACGGCTGCG GAGTTGATTC CCGTAGTAAA AGTAGATGAC AGAGTAATAG CTGATGGTAA ACCGGGACCG ATATTCCATA AACTACTGCA GCAGTTTAGA GAAATCGTTA AAGAACCTGA AGCCTTGATC TTTAAATAA
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Protein sequence | MGLKIYLDGK FVDEEEAKVS VFDHGFLYGD GVFEGIRAYH NSVFRLKDHV DRLYDSAKAV NMEIPVNKEQ MSEIILESCR QNDLKDAYIR VVVSRGKGDL GLDPRKCSVP TVVCIASSIS IYPEEMYEKG LDVITVPTRR NGPEGVNPRI KSLNYLNNIM AKIEANMAGV PEAILLNQEG YVAECTGDNI FMVKNGILKT PAIHLGLLEG VTRNEVIAIA RKEGIDVQET TFTRYDLFVA DEVFLTGTAA ELIPVVKVDD RVIADGKPGP IFHKLLQQFR EIVKEPEALI FK
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