Gene Swol_2097 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_2097 
Symbol 
ID4283218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp2413372 
End bp2414502 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content38% 
IMG OID638138978 
Productperiplasmic binding protein 
Protein accessionYP_754760 
Protein GI114567606 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.328694 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTAAGA AAGGGTTTAA GCATAAGACG CTGGCAATGG TTCTTTCACT ATTATTAATA 
GTTACTGCAT TAGCAGGTTG TTCGGGTGCG GAAAAAGTAA GCAATTCCAA TGCAGAAAAA
GAGAGTACTA CCATTACCAT AACTGACATG TCAGGGAGAG AACTGATTGT TCCCAAAGAA
ATTACGAAAA TATATTCAGC GGTTCCCATC GGAACTGTTA TGGTATATAC CATCAATCCA
CATAAACTTG TTGCTAAAAA CTTCAAATTA TCAGAATTGG AGAAAAAATA CACTATTAAA
GAACATCACG ATTTACCTGT ATTGGGTACT TACATTATGG GTGATACTGC CAATGAAGAA
GATATATTAA AGATAGCTCC AGACATAATA ATTTATGCGG GAATTATTAA TGATTCCTGG
AAATCTAAGG TGGAAGAAGC CCAGAATAGA CTGGGAATAC CCATTGTTAT GGTCGATGGA
AACCTTAAGA ATGCACCGGC AGCATATGAG TTTATGGGTA AATTATTAGG CGAAGAAGAA
AAGGCTAAGG AATTAGGCGA GTATTGTAAG AATACCCTTA ACGAAGCTGA AAAAATTGCC
GGCAAAATAC CGGAAGATTC GAGATTAAGG GTATATTATG CTTGTGGTGA AGACGGTTTA
ATGACCTATG CAGCAGGAAA TATACATTCA GAACTCATTG AAATAGTAGG AGGGAGAAAT
ATAGCTGATA TAAAAGTGGG TAGCCCTTAC CAAAGCTCCC GCTTATCAAT GGAGCAGTTG
ATTAAGTGGG ACCCACAATT AGTAGTAAGC AATAAAGTTG AGGCACGAGG AGGAGAAGGA
GGAAGTTCAT CTTTACGCAG CAAGATATTG GAAAACAGCA GCCTTAATAA TTTGGAAGCG
GTGAAAAACA AACAAGTGTA TGAAATACCA TGCGCGCCAT TTAGCTGGTT TGGCCAGCCA
CCATCAGTAG CTCGCATACT GGGAATAAAA TGGCTGGGCA ATTTGCTTTA TCCGGAAGAA
TTCAATTTTG ATATAAAACA GGAGACCAAA GAATTCTATA AATTGTTCTA TTCCTATGAT
TTATCAGAGC AGGATTTAGA TGAACTCATG AGTAATGCGT TACGAAAATA A
 
Protein sequence
MVKKGFKHKT LAMVLSLLLI VTALAGCSGA EKVSNSNAEK ESTTITITDM SGRELIVPKE 
ITKIYSAVPI GTVMVYTINP HKLVAKNFKL SELEKKYTIK EHHDLPVLGT YIMGDTANEE
DILKIAPDII IYAGIINDSW KSKVEEAQNR LGIPIVMVDG NLKNAPAAYE FMGKLLGEEE
KAKELGEYCK NTLNEAEKIA GKIPEDSRLR VYYACGEDGL MTYAAGNIHS ELIEIVGGRN
IADIKVGSPY QSSRLSMEQL IKWDPQLVVS NKVEARGGEG GSSSLRSKIL ENSSLNNLEA
VKNKQVYEIP CAPFSWFGQP PSVARILGIK WLGNLLYPEE FNFDIKQETK EFYKLFYSYD
LSEQDLDELM SNALRK