Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_2049 |
Symbol | |
ID | 4283272 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | - |
Start bp | 2347463 |
End bp | 2348131 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638138931 |
Product | uncharacterized membrane protein |
Protein accession | YP_754714 |
Protein GI | 114567560 |
COG category | [R] General function prediction only |
COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTCCAC TCAGGGACAG TACTCCAAGT AACACTTTTC CATTAATAAC GGTAACTATT ATTGCTTTGA ACCTGGCCAT CTTTTTTTAC GAGAGTTCCC TGGGTATTGA AGGCATGGTA GAGTTATTTT CCGTATTCGG ACTGACTCCG CTTAACTATA GTCAAGGCTA TGTTCCTCTT CTAGCTTATC TGCCGTTTTT GACTTCGATG TTTCTACATG GCAGTTGGAT GCATGTAATC GGTAATATGT GGATACTGTG GCTTTTTGGC GACAATCTGG AAGATAGAAT GGGTAGGGGG AATTTTATTT TATTTTACTT GAGCTGCGGG ATACTGGCCG CCTTAACCCA CTACTTCGTT AGTCCGCTTT CCAGCGAACC GGTGGTTGGA GCCTCCGGAG CTGTTGCCGG AGTGATGGGA GCGTACTTTT TGTTATTTAA GAAGGCCAGA GTTCTTACCT TTATACCGCC TTTCTTTCTC TTTAACCTAC CCGCCTGGAT TTATCTGGGC TTCTGGGCTT TAACTCAAAT CTGGTGTGGA ACCGTCAGTA TTTTCATGGC CGATGCCTGC GGAGCCATAG CCTTCTGGGC GCATATCGGT GGCTTTTTGG CTGGAATGGT GCTTTACAAG TTATTCTTGA AAAGGGAACA ACCTCTATAT AATGTTTGA
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Protein sequence | MIPLRDSTPS NTFPLITVTI IALNLAIFFY ESSLGIEGMV ELFSVFGLTP LNYSQGYVPL LAYLPFLTSM FLHGSWMHVI GNMWILWLFG DNLEDRMGRG NFILFYLSCG ILAALTHYFV SPLSSEPVVG ASGAVAGVMG AYFLLFKKAR VLTFIPPFFL FNLPAWIYLG FWALTQIWCG TVSIFMADAC GAIAFWAHIG GFLAGMVLYK LFLKREQPLY NV
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