Gene Swol_2049 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_2049 
Symbol 
ID4283272 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp2347463 
End bp2348131 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content45% 
IMG OID638138931 
Productuncharacterized membrane protein 
Protein accessionYP_754714 
Protein GI114567560 
COG category[R] General function prediction only 
COG ID[COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTCCAC TCAGGGACAG TACTCCAAGT AACACTTTTC CATTAATAAC GGTAACTATT 
ATTGCTTTGA ACCTGGCCAT CTTTTTTTAC GAGAGTTCCC TGGGTATTGA AGGCATGGTA
GAGTTATTTT CCGTATTCGG ACTGACTCCG CTTAACTATA GTCAAGGCTA TGTTCCTCTT
CTAGCTTATC TGCCGTTTTT GACTTCGATG TTTCTACATG GCAGTTGGAT GCATGTAATC
GGTAATATGT GGATACTGTG GCTTTTTGGC GACAATCTGG AAGATAGAAT GGGTAGGGGG
AATTTTATTT TATTTTACTT GAGCTGCGGG ATACTGGCCG CCTTAACCCA CTACTTCGTT
AGTCCGCTTT CCAGCGAACC GGTGGTTGGA GCCTCCGGAG CTGTTGCCGG AGTGATGGGA
GCGTACTTTT TGTTATTTAA GAAGGCCAGA GTTCTTACCT TTATACCGCC TTTCTTTCTC
TTTAACCTAC CCGCCTGGAT TTATCTGGGC TTCTGGGCTT TAACTCAAAT CTGGTGTGGA
ACCGTCAGTA TTTTCATGGC CGATGCCTGC GGAGCCATAG CCTTCTGGGC GCATATCGGT
GGCTTTTTGG CTGGAATGGT GCTTTACAAG TTATTCTTGA AAAGGGAACA ACCTCTATAT
AATGTTTGA
 
Protein sequence
MIPLRDSTPS NTFPLITVTI IALNLAIFFY ESSLGIEGMV ELFSVFGLTP LNYSQGYVPL 
LAYLPFLTSM FLHGSWMHVI GNMWILWLFG DNLEDRMGRG NFILFYLSCG ILAALTHYFV
SPLSSEPVVG ASGAVAGVMG AYFLLFKKAR VLTFIPPFFL FNLPAWIYLG FWALTQIWCG
TVSIFMADAC GAIAFWAHIG GFLAGMVLYK LFLKREQPLY NV