Gene Swol_2043 details

Gene Information

• Locus tag: Swol_2043
• Symbol: dnaE
• ID: 4283266
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Syntrophomonas wolfei subsp. wolfei str. Goettingen
• Kingdom: Bacteria
• Replicon accession: NC_008346
• Strand: -
• Start bp: 2340542
• End bp: 2343934
• Gene Length: 3393 bp
• Protein Length: 1130 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 638138925
• Product: DNA polymerase III DnaE
• Protein accession: YP_754708
• Protein GI: 114567554
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0587] DNA polymerase III, alpha subunit
• TIGRFAM ID: [TIGR00594] DNA-directed DNA polymerase III (polc)

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCGGGTA GTTTTGTTCA CTTACATAAT CATTCCGAAT ACAGTCTTCT GGACGGAGCC 
TGCCGCATCA AGGACCTGGT AAACCGGGCT GTGGAACTGG AGATGCCGGC GGTGGCCATA 
ACCGACCATG GGGTGCTCTA TGGGGTAATC GATTTTTACC GCGAGGCCCG CAAAAGGGGA 
ATCAAGCCCT TGATCGGCTG TGAGCTCTAT GTGGCCCCGC GCAGCCGTCT GGACAAGGAA 
GCCCGTATCG ATGATAATCT TTATCACCTG ACTCTGCTCT GCAAGAATGA GCTGGGTTAC 
AGGAACCTGG TACAGCTGGT GAGCCGGGCT TTCCTGGAAG GTTTTTATTA CAAGCCCCGG 
GTGGATCAGG AGCTCCTGGA AAAATACCAT GAGGGTTTAA TCGCCCTCTC CGGTTGTGTG 
GTCGGGGAGA TACCCCGCCT GCTGCAGAAC GGTGATTACC GGGGAGCCCG GGAAAAAGCC 
CTTTATTACC AGGAACTATT TGGTTCTGGG AATTTTTACC TGGAGTTGCA GGATCATGGT 
TTACAGGAGG AAAAGGCAAG CTTGCCCGGC CTGCTTCGTC TCAGCCGGGA AGATAGTATT 
CCCCTGGCGG CCAGCAATGA CTGCCATTAC CTGAGGAAAA AAGACGCTCA GGTACATGAT 
GTGCTTCTAT GTATTCAAAC CGGCTCCGTG GTAAACGATG AAAAACGCCT GCGCTTTTCG 
GGCAGCGAAT TTTATATGAA AAGCCGGGAG GAAATGGCCG CGCTTTTCCC GGATTACCCG 
GAAGCATTGG AGAACACGCT GAAGATTGCC GGCGAGTGCA ATCTCGATTT CACTTTTGGC 
GAATACCATT TACCCGTATT TGAGTTGCCG CCTGGACACA GTGCAGAGTC TTTCCTTAGT 
GAAATGGTAC ATGAGAAGTT CCGCCGCAAA TACCCTGATG CGCAGGAGAA GATAATCGAG 
CGGCTGGAAT ATGAGTTAAG GGTAATAAAT GAAATGGGCT TTGCCGCCTA TTTTCTTATT 
GTACAGGATT TGGTCAACTG GTCCCGGCAA AACGGGATTC CGGTAGGGCC GGGAAGGGGC 
TCGGCCGCAG GAAGCCTGGT TTCTTATGTG CTGGATATTA CCACTATCGA TCCCTTGCGT 
TATGACCTGC TTTTTGAACG ATTCCTCAAC CCGGAAAGGG TGAGCATGCC AGATATCGAT 
ATAGATTTTT GCTTTGAAAA GCGGGACCGG GTAATAGATT ACATCATAAG CAAATACGGG 
GCTGACCGGG TGGCCCAGAT TATAACTTTC GGGACTATGG CGGCCCGCGC CGCTATTCGG 
GATGTGGGAC GGGCCCTGGA TGTACCTTAT GGGCAGGTTG ACCGTATAGC TAAAATGGTG 
CCGGCTGAAC TGGGGGTGAG CCTAGAACGG GCCCTGGAGA TTTCGCCGGA TCTTTTTACG 
GCTTACCAGA GTGATTACAA TACCCGCAAC ATACTGGATA TTGCCCAGGC TATCGAAGGT 
ATGCCGCGTC ATGCATCGAT TCATGCTGCC GGAGTGGTTA TCGGCCGGCA GAGTTTAAGC 
GAGATTCTTC CCCTGCAAAA GACCCCGGAG GGCCATGTGC TAACCCAGTT TACCAAGGAG 
ACGGTAGAGG ATATCGGGCT ACTAAAAATG GACATATTGG GTTTGCGCAC CCTTACCGTG 
ATAGACCGGG CTCTGGAGAT AATCAGGAAG ACCCGGGACG AGGATATTGA TATTAGCAGC 
ATTCCCCTGG ATGACGAAGC GGTTTACAAA CTGCTGTCCG CCGGGGATAC GGCTGGAGTC 
TTTCAATTGG AGAGCGATGG CTTGCGCCGC CTGCTCTGCG AGATGAAGCC CGACCGCTTT 
GAGGATATTA TCGCGGTAAT TGCGCTTTAC CGCCCGGGTC CCCTGGGCAG TGGCATGGTG 
GAGGATTTTA TCAACCGGAA AAACGGCCGT CAGGAGATAG AGTATATCGA CCCCTTACTG 
GAGGATATAC TGAAGGAAAC CTATGGGGTC ATTCTCTACC AGGAGCAGGT GATGCGGGTG 
GCCAGTGAGC TGGCCGATTT TACCATGGGT GAAGCCGATG TTTTGCGGCG GGCCATGGGC 
AAAAAGAAGG CGGAGGAATT GATGGCCCAG CGGGATAAAT TCATAGCCGG AGCAGCCCGG 
AATGGTATTG GCCTGGCCAC CGCCAGCCAT CTCTTTGATC TTATGGAAAG CTTTGCCGGC 
TATGGTTTTA ACAAAAGCCA CTCAGCCGCC TACGCCCTGA TTTCCTACCA GACCGCTTAC 
CTAAAAGCCC ATTACCCGGT AGAATACCTG TGCGCTTTTT TGAGCAGTGT AATAGATAAT 
CAGGATAAAG TAGTTTCCTA TATTAAAGAA TGCCGGAGGC TAGGGATAAA GGTACTGCCC 
CCGGACATTA ACGAAAGTTA TGAGAACTTT AGCGTGGCCC GGGATGCCAT TCGCTTTGGC 
CTGGGGGCGA TAAAGAATGT AGGGCAGAAT GCGGTGAAAA ACATCGTAGA GGCGCGAAAA 
CAGGGGTTCT ATACCTCCCT TTTTGACTTC TGCCGCCGGG TGGATCTGGG GCAATTGAAC 
AAGCGTATGC TGGAAAACCT TATATTGGCC GGTTGTTTTG ACTCGCTGGG TTTTAGCCGC 
AAAGGGGCCT TATCCATTAT GGAGGAATGC GTCAATATCT CTCTGGCGAT AAAACAAAAT 
GAATGCAGCC AACAAGGCTC TCTTTTCGGG GATGAAATGG AGATGGTGGA AGAGCCGATT 
ATAAAGCTGA AGGGCGAATA TGAATCCCGG GAACGGCTGT TAAAAGAGAA AGAGGTACTG 
GGCTTTTTTG TTTCTGAGAG TCCCCTGGAT GAATTCCGCT CTCTGTTACC CCTGATCAGT 
ACCCATTGTT TGGAAGATAT TAACCTTTGG GAAGAAGAAT CCTATGTTCG CGTGGCGGGG 
ATAGTGGTGA ATTTAAGCCG CCGGGTCAGC CGCAAAGGGG AGAGTTATGC TCGCTTTGTC 
CTGGAGGATC TGGGGGGGAG GATCGAAGTG CTGGTTTTCC CTTCGGCCTA CCGGAAGAAT 
GGTGATCGTC TGGAGGCGGA CCGGGCGGTA ATTGTTGAAG GCTACTTCGA CCGGCGTGAG 
GAACAGCCCA AAATAGCCTT GCGGAAAACG GGCCCCATAC CGGAGTCGTT GCGGGAAATG 
CATCTTCGCC TGGCCGGGAA TGGCGATGGC GAAATGGATA GAAATAAGCT GGTAAAACTT 
TTGCAAAAAT ACCCGGGGGA TATTGAAGTC TTTTTGCACC TGCCGGGACG CCGCCTGCTG 
GTCTTAAATG AAAAATTCAA TGTTTCTCCC AGCCAGGATT TGAAGCAGGA ATTGGCGGCC 
GTTTACGGTC CGCAGAATGT CTGGTTCAAT TAG 

 

Protein sequence

MPGSFVHLHN HSEYSLLDGA CRIKDLVNRA VELEMPAVAI TDHGVLYGVI DFYREARKRG 
IKPLIGCELY VAPRSRLDKE ARIDDNLYHL TLLCKNELGY RNLVQLVSRA FLEGFYYKPR 
VDQELLEKYH EGLIALSGCV VGEIPRLLQN GDYRGAREKA LYYQELFGSG NFYLELQDHG 
LQEEKASLPG LLRLSREDSI PLAASNDCHY LRKKDAQVHD VLLCIQTGSV VNDEKRLRFS 
GSEFYMKSRE EMAALFPDYP EALENTLKIA GECNLDFTFG EYHLPVFELP PGHSAESFLS 
EMVHEKFRRK YPDAQEKIIE RLEYELRVIN EMGFAAYFLI VQDLVNWSRQ NGIPVGPGRG 
SAAGSLVSYV LDITTIDPLR YDLLFERFLN PERVSMPDID IDFCFEKRDR VIDYIISKYG 
ADRVAQIITF GTMAARAAIR DVGRALDVPY GQVDRIAKMV PAELGVSLER ALEISPDLFT 
AYQSDYNTRN ILDIAQAIEG MPRHASIHAA GVVIGRQSLS EILPLQKTPE GHVLTQFTKE 
TVEDIGLLKM DILGLRTLTV IDRALEIIRK TRDEDIDISS IPLDDEAVYK LLSAGDTAGV 
FQLESDGLRR LLCEMKPDRF EDIIAVIALY RPGPLGSGMV EDFINRKNGR QEIEYIDPLL 
EDILKETYGV ILYQEQVMRV ASELADFTMG EADVLRRAMG KKKAEELMAQ RDKFIAGAAR 
NGIGLATASH LFDLMESFAG YGFNKSHSAA YALISYQTAY LKAHYPVEYL CAFLSSVIDN 
QDKVVSYIKE CRRLGIKVLP PDINESYENF SVARDAIRFG LGAIKNVGQN AVKNIVEARK 
QGFYTSLFDF CRRVDLGQLN KRMLENLILA GCFDSLGFSR KGALSIMEEC VNISLAIKQN 
ECSQQGSLFG DEMEMVEEPI IKLKGEYESR ERLLKEKEVL GFFVSESPLD EFRSLLPLIS 
THCLEDINLW EEESYVRVAG IVVNLSRRVS RKGESYARFV LEDLGGRIEV LVFPSAYRKN 
GDRLEADRAV IVEGYFDRRE EQPKIALRKT GPIPESLREM HLRLAGNGDG EMDRNKLVKL 
LQKYPGDIEV FLHLPGRRLL VLNEKFNVSP SQDLKQELAA VYGPQNVWFN