Gene Swol_1948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1948 
Symbol 
ID4283375 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp2226850 
End bp2227719 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content45% 
IMG OID638138831 
Productcobalt ABC transporter ATPase 
Protein accessionYP_754616 
Protein GI114567462 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1122] ABC-type cobalt transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.701043 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGGTAA TTGAGACGAA GGAATTGACC CATATCTATT TAACTGGAAC CCCCTATGAA 
AAAAAAGCTT TAAACCAAGT ATCTCTATCT ATAAATAAAG GTGAGTTGTT TGGAATCATT
GGAGCCAATG GTTCAGGTAA ATCCACCCTT ATTCAGCACT TCAACGGCTT GTTGACTCCT
AGTTACGGAA CTGTACGAGT GTATGGAGAG GATACATCAA ATAGATCCTA CCGCAATAAG
TTATGGAAAA AAGTTGGTCT GATGTTTCAG TTTCCCGAAC AACAGCTTTT TGCCAGTACA
GTTTTTGACG AGCTGGCTTT TGGGCTTAAG AATATGGGTT TGGAGGGTCG GGAGATAGAG
AACAGGGTTG AGGAGGCCCT GCTTCAAGTT GGCTTGAACC CAAAGGAGGT TATTAAGGTA
CCGCCGCTGG GATTAAGTGG GGGTGCCCGT CGTCAGGTAG CTTTAGCCTG TATCCTGGCC
ATGCGCCCGA CCATCCTGGT TCTGGATGAA CCGACCGCTG GTGTTGACCC CTCTGCTAGC
GAACATATCT TAAAGGCTAT CAAAAAAATA CAGCGGGAAC AGCAAGCTAC GGTAGTTATG
GTTTCTCATT ATGTTAACGA TTTGATTTTC CTGGCGGATA AACTGGCTTT TCTCAAAGAG
GGTAGACTAC TGAGCTATGG AGACAAGAAG ACGGTTTTTA GAGATATGGC TCTATGGGAT
ATGAATAATC TAATCCTTCC GGAACATTTA AAATTAATGC ATCACCTGGC AGCTTACGGG
CTACCGGTGA ACACCGAAAT ATTAACCCTG GAAGAGGCTG CTACGGAAAT AAGCAGAGTG
ATGGAGGAGT GGGCCAGGTG CGAGAGATGA
 
Protein sequence
MPVIETKELT HIYLTGTPYE KKALNQVSLS INKGELFGII GANGSGKSTL IQHFNGLLTP 
SYGTVRVYGE DTSNRSYRNK LWKKVGLMFQ FPEQQLFAST VFDELAFGLK NMGLEGREIE
NRVEEALLQV GLNPKEVIKV PPLGLSGGAR RQVALACILA MRPTILVLDE PTAGVDPSAS
EHILKAIKKI QREQQATVVM VSHYVNDLIF LADKLAFLKE GRLLSYGDKK TVFRDMALWD
MNNLILPEHL KLMHHLAAYG LPVNTEILTL EEAATEISRV MEEWARCER