| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_1922 |
|---|
| Symbol | |
|---|
| ID | 4282393 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008346 |
|---|
| Strand | - |
|---|
| Start bp | 2192073 |
|---|
| End bp | 2193200 |
|---|
| Gene Length | 1128 bp |
|---|
| Protein Length | 375 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 638138804 |
|---|
| Product | GTPase |
|---|
| Protein accession | YP_754590 |
|---|
| Protein GI | 114567436 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2262] GTPases |
|---|
| TIGRFAM ID | [TIGR03156] GTP-binding protein HflX |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.321489 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAAC AAGGAGCTGA GTCATTGTCT AAAAGAACTA CTTGGGAAAA GGCGATACTG
GTTGCTGTAA AAACCGGGGC CACAAAAGAA GCGGAGTTTA ACTCCTCTTT GCAGGAACTG
GCCGGATTGG CTGAGGCCGC CGGAGCGAAA GTGGTGGCTA CTCTAACCCA GGCTCGCGAC
AAGCCCCATG CTGCCACTTA TATCGGCAAA GGTAAACTAC AGGAACTTGA GCATCTGCTA
GCTGAAAAGG AGCCTGAGCT CTTGATCTTT GATAGTGAGC TTTCTCCCAC CCAGCTTAGA
AAGCTGGAGG ATAAACTACA GATAAAAATA GTTGATAGAA CTCTTCTGAT TCTGGATATC
TTTGGCCAGC GGGCCAGAAG CCGGGAAGGC CTTTTACAGG TGGAGCTGGC GAGCCTGGAA
TACCGCTTAC CACGGCTTAC AGGTATAGGA AAAGAAATGA GCCGACTGGG GGCGGGAATA
GGGACCAGGG GTGCTGGAGA GCAGAAACTG GAATTGGACC GGCGGCATAT TAGAAGCCGT
ATTCGGGAAA TAAAACGGCA GATGGAAAAG TTGGAAAAGA CCCGGGAATT GCATAAAAAA
CAGCGGCACC GGGCTGGATA CCAGGTTATA TCCCTGGTGG GCTATACCAA TGCCGGGAAG
TCCTCCTTGT TCAATGCTCT TTGCCAGGTG GCCCATAGCA GTGGGCAGCC CCAGGTTGAA
GCTAACCGCC GCCTTTTTCA AACCCTGGAT ACCACTACCC GGAAAATTAA GTTGGATTCC
CACTATGAAG TTCTCATTAC GGACACGGTT GGCTTTATTC AGAACTTGCC TCATCATTTG
GTGGCAGCTT TTCGCTCTAC CCTGGAGGAA GCGGTGGCAG CTGATCTGCT TTTACATGTA
GTAGATTTAG CTGATCCTGC TTATCTGGAT AAGATCAAGG TAGTGGAAGG GGTGCTGGAA
GAACTCGGAG CCGAAAAAGA AAGAATCATG CCGGTATTCA ACAAAGTTGA CCTCTTGGCA
GGAATAAGTC CCATCCAAGC TCCTCCCAAC TATGTATCGG CCCGCACTGG CCAGGGGATA
GAGGAGCTGC TTGGCCAAAT CAAAAACCGG CTGGAAGCTA TATCTTAA
|
|---|
| Protein sequence | MNKQGAESLS KRTTWEKAIL VAVKTGATKE AEFNSSLQEL AGLAEAAGAK VVATLTQARD
KPHAATYIGK GKLQELEHLL AEKEPELLIF DSELSPTQLR KLEDKLQIKI VDRTLLILDI
FGQRARSREG LLQVELASLE YRLPRLTGIG KEMSRLGAGI GTRGAGEQKL ELDRRHIRSR
IREIKRQMEK LEKTRELHKK QRHRAGYQVI SLVGYTNAGK SSLFNALCQV AHSSGQPQVE
ANRRLFQTLD TTTRKIKLDS HYEVLITDTV GFIQNLPHHL VAAFRSTLEE AVAADLLLHV
VDLADPAYLD KIKVVEGVLE ELGAEKERIM PVFNKVDLLA GISPIQAPPN YVSARTGQGI
EELLGQIKNR LEAIS
|
|---|
| |