| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_1920 |
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| Symbol | |
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| ID | 4283581 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008346 |
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| Strand | - |
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| Start bp | 2188598 |
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| End bp | 2190400 |
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| Gene Length | 1803 bp |
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| Protein Length | 600 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638138802 |
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| Product | oligoendopeptidase F |
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| Protein accession | YP_754588 |
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| Protein GI | 114567434 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1164] Oligoendopeptidase F |
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| TIGRFAM ID | [TIGR00181] oligoendopeptidase F |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAGGCC AGAGCAAAAA ACGGGAAGAA ATCGGCCCGG AGTATAAATG GAAGCTGGAA
GATATTTATG CGGACGAAAA TAGTTGGGAA GAGGATTATA AAAAGCTGGA AGAACAGATA
CCGGCACTGG AGAAGTATAA GGGAGTACTG GGTAGTTCTT CCACCCAACT CTTGCAAGTG
TTGGAATTTT CCCATGAACT GGAGCGCAAG GCGGAAAAGC TCTATGTTTA TGCCCGTATG
AGGCGGGATG AGGATAACGG CAATTCCCAC TATCAAGCCC TCTTTGACCG GGTGCAGCGA
CTGAGTATAG AACTGGGCAG TGCCAGCGCC TATATTGTTC CGGAGATAAT CAGCCTGGCC
CCGGAGAAGA TTCGAGCTTT TCTGGACGAA AATCAAGATC TGCAATTGTA TTCGCGTTTG
CTGGATGAAT TGATGCGACA AAAAGAACAT ATACTCTCCC CGGAGGAAGA GCGCATATTG
GCTATGAGTG CGGATTTGTC CCTGGCAGCC AAAAATATCT TTGGAATGCT CAATAATGCC
GATATCAAAT TCCCGGTAAT TCAAGATGAA GAAGGCAAAG CGGTGGAGCT TACCAAAGGG
CGCTATGGCA GCTTTATGGA GAGTAATGAG CGCCGGGTGA GAAAAGAAGC CTTTACGGCT
TTATACGGCT CTTATGGTAA AGTAAAGAAT ACCCTGGCTA TGAGCCTTGC TTCCAATGTC
AAAAATGATA TTTTCTATTC CCGGGTGCGC AAGTATCCCT CAGCTTTGGA AGCTTCGCTG
GATCAGGATA ATATTTCCCC TGAGGTTTAT GAACGCCTGG TGGAGACGGT GCATAATAAT
ATGGAACCCA TGTATCGTTA CCTGCGCTTG CGGAAAAAGG CTCTGGGTCT GGATGAATTG
CATATGTATG ACATCTATGC TCCGTTGGTT AAGGAATTTA AAAGCAAGGT AAGCTATGAG
AAGAGCCAGG AAATGGTATT AAAGGCCCTG CAGCCCCTGG GGGATGAATA CCTGGCAATT
TTGCGGGGCG GGCTGAAGGG CGGCTGGATT GATGTTTATG AGAACGAGGG AAAGACCAGC
GGGGCTTATT CCTGGGGTTG TTACGACTCC CATCCATATG TTCTTATGAA CTATGATGAT
AAACTGGATG ATGTCTTCAC CCTGGCTCAT GAGATGGGTC ATGCCCTGCA CAGTTATTAT
TCCAATAAAA ATCAGCCCTA TGTTTACAGC CAGTATAGTA TTTTTGTGGC GGAAGTGGCG
TCTACGGTTA ATGAACTGCT GCTTATTGAT TATTTGCTGG CCCAAAGCCG TGAACCCCGG
GAAAAGGCCT ATCTTATCAA CCACTACCTG GAACAGTTCC GGGGAACCGT ATACCGCCAG
ACCATGTTTG CCGAATTTGA GAAGAAGATT CATGAGCAGG TGGAGCAGGG CCAGACCTTG
ACGGCAGACG GTCTTTGCCA GAGCTACCGT GAATTAAACC GTTTGTACTA TGGCACGGAT
ACGGTATTGG ATGAAGAAAT AGATATGGAA TGGGCTCGTA TACCTCATTT TTATTCTGCC
TTCTATGTTT ATAAATATGC TACCGGTTTT TCCGCTGCGG TAGCTTTGAA GGAGCAGATA
TTGCAAGAGG GTAAGCCGGC TGTTGCTCGC TACCTGGAAT TCCTCAAATC AGGCAGCTCT
GATTACCCGC TTAATCTACT TAAAAAAGCC GGGGTTGATC TTACTACCCC TGAACCGGTA
GAAAAAGCTT TGCACCTTTT TGCCCGGCTG GTGGCGGAAA TGGAAGCGGT GTTGAATGTT
TGA
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| Protein sequence | MEGQSKKREE IGPEYKWKLE DIYADENSWE EDYKKLEEQI PALEKYKGVL GSSSTQLLQV
LEFSHELERK AEKLYVYARM RRDEDNGNSH YQALFDRVQR LSIELGSASA YIVPEIISLA
PEKIRAFLDE NQDLQLYSRL LDELMRQKEH ILSPEEERIL AMSADLSLAA KNIFGMLNNA
DIKFPVIQDE EGKAVELTKG RYGSFMESNE RRVRKEAFTA LYGSYGKVKN TLAMSLASNV
KNDIFYSRVR KYPSALEASL DQDNISPEVY ERLVETVHNN MEPMYRYLRL RKKALGLDEL
HMYDIYAPLV KEFKSKVSYE KSQEMVLKAL QPLGDEYLAI LRGGLKGGWI DVYENEGKTS
GAYSWGCYDS HPYVLMNYDD KLDDVFTLAH EMGHALHSYY SNKNQPYVYS QYSIFVAEVA
STVNELLLID YLLAQSREPR EKAYLINHYL EQFRGTVYRQ TMFAEFEKKI HEQVEQGQTL
TADGLCQSYR ELNRLYYGTD TVLDEEIDME WARIPHFYSA FYVYKYATGF SAAVALKEQI
LQEGKPAVAR YLEFLKSGSS DYPLNLLKKA GVDLTTPEPV EKALHLFARL VAEMEAVLNV
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