Gene Swol_1889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1889 
Symbol 
ID4283435 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp2150087 
End bp2150887 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content46% 
IMG OID638138772 
ProductABC 3 transport family protein 
Protein accessionYP_754558 
Protein GI114567404 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATTAC TCCAATTTGA TTTCCTGCGC CATGCTCTGG CTACCGGGAT TCTGGCCAGT 
ATTGCTTGCG GCGTGGTGGG AAGCTATGTG GTAATAAAGA GAATAGTATT TATTAGTGGT
GGCATATCCC ACACTGCTTA TGGAGGAATC GGACTGGGAT ATTTCCTGGG CATCAATCCC
ATACTGGGAG CGGTATTTTT TACCGTAATC TCGGCTCTGG GCATGGGAAT ACTGGTCGAA
CGAACCCGTC AGCGGGAAGA CACTCTCATA GGTATAATTT GGGCGGTAGG TATGGCCCTG
GGGGTTATTT TTGTCAAACT CTCCCCCGGC TATACTAGTG ATTTAATGAG TTATCTCTTT
GGCAACATTC TGGCGGTACC TTTCCAGGAT TTAATATTGA TAAGCATTCT GGATGTCATT
ATTGTAGCAG TGGTTTGCTT TTATTTTGAA GAGCTGAAAG CAGTTGCTTT CGATGAAGAA
TTTGCCCAGG TTGCAGGTAT CTCCACCCGC TTTTTTAACC TGTTATTATT ACTCTTGATA
GCGTTGACAG TAGTAGTAAT GATAAGAGCG GTGGGAATTA TCCTGGTGAT TGCGTTGATG
AGCATACCTC CGGCCATTGC CGGGCAGTCA TCAAAGAGCT TGAGAGGGAT GATGGTACTG
GCCATTATCC TGGGTATAGT ATTCAATAGC GGGGGGATTT TCCTTTCTTA TGTCTTTGAC
CTGCCTTCCG GAGCCACTAT TATTTTGCTG GCGGCGGCCG GTTTTATCAT CTCTATAGCT
AGCAAGCAAC GCTTTGGATA G
 
Protein sequence
MELLQFDFLR HALATGILAS IACGVVGSYV VIKRIVFISG GISHTAYGGI GLGYFLGINP 
ILGAVFFTVI SALGMGILVE RTRQREDTLI GIIWAVGMAL GVIFVKLSPG YTSDLMSYLF
GNILAVPFQD LILISILDVI IVAVVCFYFE ELKAVAFDEE FAQVAGISTR FFNLLLLLLI
ALTVVVMIRA VGIILVIALM SIPPAIAGQS SKSLRGMMVL AIILGIVFNS GGIFLSYVFD
LPSGATIILL AAAGFIISIA SKQRFG