Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_1788 |
Symbol | |
ID | 4283455 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | - |
Start bp | 2041580 |
End bp | 2043820 |
Gene Length | 2241 bp |
Protein Length | 746 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638138671 |
Product | hypothetical protein |
Protein accession | YP_754457 |
Protein GI | 114567303 |
COG category | [S] Function unknown |
COG ID | [COG1944] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00702] uncharacterized domain [TIGR03604] bacteriocin biosynthesis docking scaffold, SagD family |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATGAAA AACCACAATT CAAAGCGCAT TTTAATATCC ATATAGTCGG GGATGAAAAA GCGGTTTTTC TTCTGTCGGA GCTGGACTAC TATGTATTGC AGGGCCGGAT TTATTGCCTG CTGGCGCCGC TGCTTGACGG AAAGCACAGT GTTGATCAAA TTATTGATCA CCTGGCTGGT CAAGCTTCTA TCGCCGAAAT ATACTACGCC CTGGCGCTTT TGGAGAAGAA AGCCTATATC ACAGAAGCCG GGGGGGATTT TCCCCGGGAG CAACTGGCCT TCTGGTCGGC GCTAGGGGTT GAAACTCCTG CGCTTTTAGA AAAGGTAAAA AGCAATCCTG TTTCCGTAAT ATCCCTGGGC AATGATTCCA CTGGGACTTT GCTATCAATC TTGAGAGAAA TGCAACTGGA AATAGCAGAA AAAGCGGAGC TGCTGATTGT GCTGGTGGAT GATTACCTGC AACCGGAACT GGAGGAATTA AATCAAAAAT TTTACCGGGA AAAACAGTCC TGGATACTGG TCAAGGCCAG GGGCAGCATT CCCTGGCTGG GTCCCCTCTT TATTCCAAGG AAAACAGCCT GCTGGCAATG CCTGGCCCAA CGTTTACAAA ACAACCGGGA TGTGGAAGAA TATATCCGCC GGCAGCAGGA GCTTCAATCC CCGGTAAACA TACCCCAGGG TACTCTACCG GCCACCCGCG CCCTGGTTTG GAACCTGCTG GCAGTGGAAG TGGCCAAGCA GTTGCTCAGT GGCCAGAGCC TGTTTTCCGA AAACAAGATG ATTAGCCTGG ATATATATAA CATGAGTATA GAAAGCCATA CCCTGGTAAA AAGACCCCAG TGCCCAATCT GTGGGCAAGC GGCTGATATA CATAAAGCAG CCCAGCCTCC CTTGCTACAA TCTACTCGAA AGCTATTTAC CTTTGACGGG GGACATCGGA GCATTTCGCC GGAAGAAACC CTGCAAAAAT ATGGACATCA TGTTTCCCCT ATTACTGGTG TGGTGAAGTT CCTCCATAAC CCGGTCGAAG CTGATCCCTT TCTAAAAGTG TATTACTCCG GACATAATCG TGCCGCCAAG TATGGAAACC TGGCTTTCCT GCGTGGCGGT TTGCGTTCCC AGAGTGCTGG AAAAGGCATA AGCGAGATGC AGGCCAAAGC CGGTGCCCTT TGTGAAGCCG TAGAGCGTTA TTCCGGTGTA TTCAGGGGAG AGGAGACCCG GATAAGAGCC AGCTACCGGG AACTGGGGGA AGAGGCGATT CATCCTAACC GGATTATGAA TTTCAGCTCT ACCCAGTACC TGAACCAGGA ACTTTCCAAT GCCAGGGAGG GCAAGTTTAA CCAGGTACCT GAACCCTTTG ACGAGAATCA GGAAATGGAC TGGACAGCGG TATGGTCCCT AACCCGCAAA AAATTCCGCT ACCTGCCTAC GGCCTTTTGT TACTTCAGCC ACCCGGAAAA CAAAACGGTT TTTTCCTGTT CCAATGGCAA TGCTTCCGGC AACATCCTGG AGGAAGCCAT TTTACAAGGC TTTTTTGAAC TGGTGGAACG CGATAGTGTG GCCATTTGGT GGTATAATCG TCTTCAGATG CCGGAAGTGG ATTTGGCCAG TTTCAACGAA CCCTTTATTC ATGAAATGCA GCGTTATTAT TGTCGGCATG ATCGGGAAAT CTGGGTTTTG GATTTAAGCA GCGATTTGAA TATCCCGACA TTTGCCGCAC TGACCCGTAA AAGCAGCGGA GGCCAGGAGG CTATCATGAT GGGGTTTGGT GCTCACTTTG ATGCCCGCCT GGCTCTTATA CGGGCTTTAA CCGAGCTCAA TCAGATGATG CCTTTTGTTC TGGAGCTGGA AAATGGCAAA TGGGGGGAAG ACATTATTAT TGATAACGTT ACCCTGGAAT GGATGAAGCA AGCCACGGTG GCCAATCAGC CTTATCTGCT TCCCCATTCG GGCAAAAGCG TGCGAAAAGC CGGAGACTAT AATGATTTGT CCGGGGAAGA TTTCTTGAGC GATATAGAGA GCTGTCGCCA AATCATAGAG CGCAAGGGCA TGGAAATGCT GGTCCTGGAG CAGACCCGGC CCGATATCGG TATAGCGGTG GTTAAGGTAA TTGTACCCGG ATTAAGGCAC TTCTGGAAAC GCCTGGCCCC CGGCCGCCTG TATGATGTGC CGGTGGAAAT GGGCTGGCTT CCGCTACCCA GGCTGGAAAG CGAGATGAAT CCTATTGGGA TGTTTTTGTA A
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Protein sequence | MHEKPQFKAH FNIHIVGDEK AVFLLSELDY YVLQGRIYCL LAPLLDGKHS VDQIIDHLAG QASIAEIYYA LALLEKKAYI TEAGGDFPRE QLAFWSALGV ETPALLEKVK SNPVSVISLG NDSTGTLLSI LREMQLEIAE KAELLIVLVD DYLQPELEEL NQKFYREKQS WILVKARGSI PWLGPLFIPR KTACWQCLAQ RLQNNRDVEE YIRRQQELQS PVNIPQGTLP ATRALVWNLL AVEVAKQLLS GQSLFSENKM ISLDIYNMSI ESHTLVKRPQ CPICGQAADI HKAAQPPLLQ STRKLFTFDG GHRSISPEET LQKYGHHVSP ITGVVKFLHN PVEADPFLKV YYSGHNRAAK YGNLAFLRGG LRSQSAGKGI SEMQAKAGAL CEAVERYSGV FRGEETRIRA SYRELGEEAI HPNRIMNFSS TQYLNQELSN AREGKFNQVP EPFDENQEMD WTAVWSLTRK KFRYLPTAFC YFSHPENKTV FSCSNGNASG NILEEAILQG FFELVERDSV AIWWYNRLQM PEVDLASFNE PFIHEMQRYY CRHDREIWVL DLSSDLNIPT FAALTRKSSG GQEAIMMGFG AHFDARLALI RALTELNQMM PFVLELENGK WGEDIIIDNV TLEWMKQATV ANQPYLLPHS GKSVRKAGDY NDLSGEDFLS DIESCRQIIE RKGMEMLVLE QTRPDIGIAV VKVIVPGLRH FWKRLAPGRL YDVPVEMGWL PLPRLESEMN PIGMFL
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