Gene Swol_1788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1788 
Symbol 
ID4283455 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp2041580 
End bp2043820 
Gene Length2241 bp 
Protein Length746 aa 
Translation table11 
GC content50% 
IMG OID638138671 
Producthypothetical protein 
Protein accessionYP_754457 
Protein GI114567303 
COG category[S] Function unknown 
COG ID[COG1944] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00702] uncharacterized domain
[TIGR03604] bacteriocin biosynthesis docking scaffold, SagD family 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATGAAA AACCACAATT CAAAGCGCAT TTTAATATCC ATATAGTCGG GGATGAAAAA 
GCGGTTTTTC TTCTGTCGGA GCTGGACTAC TATGTATTGC AGGGCCGGAT TTATTGCCTG
CTGGCGCCGC TGCTTGACGG AAAGCACAGT GTTGATCAAA TTATTGATCA CCTGGCTGGT
CAAGCTTCTA TCGCCGAAAT ATACTACGCC CTGGCGCTTT TGGAGAAGAA AGCCTATATC
ACAGAAGCCG GGGGGGATTT TCCCCGGGAG CAACTGGCCT TCTGGTCGGC GCTAGGGGTT
GAAACTCCTG CGCTTTTAGA AAAGGTAAAA AGCAATCCTG TTTCCGTAAT ATCCCTGGGC
AATGATTCCA CTGGGACTTT GCTATCAATC TTGAGAGAAA TGCAACTGGA AATAGCAGAA
AAAGCGGAGC TGCTGATTGT GCTGGTGGAT GATTACCTGC AACCGGAACT GGAGGAATTA
AATCAAAAAT TTTACCGGGA AAAACAGTCC TGGATACTGG TCAAGGCCAG GGGCAGCATT
CCCTGGCTGG GTCCCCTCTT TATTCCAAGG AAAACAGCCT GCTGGCAATG CCTGGCCCAA
CGTTTACAAA ACAACCGGGA TGTGGAAGAA TATATCCGCC GGCAGCAGGA GCTTCAATCC
CCGGTAAACA TACCCCAGGG TACTCTACCG GCCACCCGCG CCCTGGTTTG GAACCTGCTG
GCAGTGGAAG TGGCCAAGCA GTTGCTCAGT GGCCAGAGCC TGTTTTCCGA AAACAAGATG
ATTAGCCTGG ATATATATAA CATGAGTATA GAAAGCCATA CCCTGGTAAA AAGACCCCAG
TGCCCAATCT GTGGGCAAGC GGCTGATATA CATAAAGCAG CCCAGCCTCC CTTGCTACAA
TCTACTCGAA AGCTATTTAC CTTTGACGGG GGACATCGGA GCATTTCGCC GGAAGAAACC
CTGCAAAAAT ATGGACATCA TGTTTCCCCT ATTACTGGTG TGGTGAAGTT CCTCCATAAC
CCGGTCGAAG CTGATCCCTT TCTAAAAGTG TATTACTCCG GACATAATCG TGCCGCCAAG
TATGGAAACC TGGCTTTCCT GCGTGGCGGT TTGCGTTCCC AGAGTGCTGG AAAAGGCATA
AGCGAGATGC AGGCCAAAGC CGGTGCCCTT TGTGAAGCCG TAGAGCGTTA TTCCGGTGTA
TTCAGGGGAG AGGAGACCCG GATAAGAGCC AGCTACCGGG AACTGGGGGA AGAGGCGATT
CATCCTAACC GGATTATGAA TTTCAGCTCT ACCCAGTACC TGAACCAGGA ACTTTCCAAT
GCCAGGGAGG GCAAGTTTAA CCAGGTACCT GAACCCTTTG ACGAGAATCA GGAAATGGAC
TGGACAGCGG TATGGTCCCT AACCCGCAAA AAATTCCGCT ACCTGCCTAC GGCCTTTTGT
TACTTCAGCC ACCCGGAAAA CAAAACGGTT TTTTCCTGTT CCAATGGCAA TGCTTCCGGC
AACATCCTGG AGGAAGCCAT TTTACAAGGC TTTTTTGAAC TGGTGGAACG CGATAGTGTG
GCCATTTGGT GGTATAATCG TCTTCAGATG CCGGAAGTGG ATTTGGCCAG TTTCAACGAA
CCCTTTATTC ATGAAATGCA GCGTTATTAT TGTCGGCATG ATCGGGAAAT CTGGGTTTTG
GATTTAAGCA GCGATTTGAA TATCCCGACA TTTGCCGCAC TGACCCGTAA AAGCAGCGGA
GGCCAGGAGG CTATCATGAT GGGGTTTGGT GCTCACTTTG ATGCCCGCCT GGCTCTTATA
CGGGCTTTAA CCGAGCTCAA TCAGATGATG CCTTTTGTTC TGGAGCTGGA AAATGGCAAA
TGGGGGGAAG ACATTATTAT TGATAACGTT ACCCTGGAAT GGATGAAGCA AGCCACGGTG
GCCAATCAGC CTTATCTGCT TCCCCATTCG GGCAAAAGCG TGCGAAAAGC CGGAGACTAT
AATGATTTGT CCGGGGAAGA TTTCTTGAGC GATATAGAGA GCTGTCGCCA AATCATAGAG
CGCAAGGGCA TGGAAATGCT GGTCCTGGAG CAGACCCGGC CCGATATCGG TATAGCGGTG
GTTAAGGTAA TTGTACCCGG ATTAAGGCAC TTCTGGAAAC GCCTGGCCCC CGGCCGCCTG
TATGATGTGC CGGTGGAAAT GGGCTGGCTT CCGCTACCCA GGCTGGAAAG CGAGATGAAT
CCTATTGGGA TGTTTTTGTA A
 
Protein sequence
MHEKPQFKAH FNIHIVGDEK AVFLLSELDY YVLQGRIYCL LAPLLDGKHS VDQIIDHLAG 
QASIAEIYYA LALLEKKAYI TEAGGDFPRE QLAFWSALGV ETPALLEKVK SNPVSVISLG
NDSTGTLLSI LREMQLEIAE KAELLIVLVD DYLQPELEEL NQKFYREKQS WILVKARGSI
PWLGPLFIPR KTACWQCLAQ RLQNNRDVEE YIRRQQELQS PVNIPQGTLP ATRALVWNLL
AVEVAKQLLS GQSLFSENKM ISLDIYNMSI ESHTLVKRPQ CPICGQAADI HKAAQPPLLQ
STRKLFTFDG GHRSISPEET LQKYGHHVSP ITGVVKFLHN PVEADPFLKV YYSGHNRAAK
YGNLAFLRGG LRSQSAGKGI SEMQAKAGAL CEAVERYSGV FRGEETRIRA SYRELGEEAI
HPNRIMNFSS TQYLNQELSN AREGKFNQVP EPFDENQEMD WTAVWSLTRK KFRYLPTAFC
YFSHPENKTV FSCSNGNASG NILEEAILQG FFELVERDSV AIWWYNRLQM PEVDLASFNE
PFIHEMQRYY CRHDREIWVL DLSSDLNIPT FAALTRKSSG GQEAIMMGFG AHFDARLALI
RALTELNQMM PFVLELENGK WGEDIIIDNV TLEWMKQATV ANQPYLLPHS GKSVRKAGDY
NDLSGEDFLS DIESCRQIIE RKGMEMLVLE QTRPDIGIAV VKVIVPGLRH FWKRLAPGRL
YDVPVEMGWL PLPRLESEMN PIGMFL