Gene Swol_1776 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1776 
Symbol 
ID4282738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp2028988 
End bp2029629 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content51% 
IMG OID638138659 
Productphosphoribosylglycinamide formyltransferase 
Protein accessionYP_754445 
Protein GI114567291 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0299] Folate-dependent phosphoribosylglycinamide formyltransferase PurN 
TIGRFAM ID[TIGR00639] phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000344484 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTAGAG TAAGGGAAGC CGGGCGTATC AGCCTGGCGG TTCTGGCCTC CGGGCGGGGA 
AGTAATTTTG ATGCCCTCTG CCAGGCAGTG GAAAGAGGCC AGTTGGATGC TGATATCAAG
CTCTTGCTCA GTGACCGCAG GGATGCTCCC GCTTTGGAAA AGGCGGCCCG CCGGGGGATA
GAATCGTTTT TTCTTTCCCC AGCAGATTTT ACTAGTCGTG ATAATTATGA GGTTTGCCTC
TTGCAAAAAC TCCGGGAACA CGGGGTGGAA ATCATAGCTC TGGCCGGCTA TATGCGCCTG
GTAGGAAAAG TGCTTTTACA AGAATATAAA GGGAAGATAA TAAATATTCA TCCGGCGCTT
TTGCCATCTT TTCCTGGCTT GAATGCCCAG AGCCAGGCCT TAAACTATGG AGTCAGATTC
AGCGGTTGCA CTGTACATAT AGTTGATGAA GGCATGGATA CCGGGCCGAT ATTAATGCAG
GCCGTGGTTC CGGTTTACCA GGATGACGAT GAGGACAGCC TGGCGGCGAG GATACTGGTG
GAAGAACATC AGATTTACTG GCGTTCTCTA CAGCTATTGG CCGAGGGACG CGTTTTTTTG
GATGGTCGCC GGGTCGTAAT AGCCGATAAA CAAGGAGGTT AG
 
Protein sequence
MIRVREAGRI SLAVLASGRG SNFDALCQAV ERGQLDADIK LLLSDRRDAP ALEKAARRGI 
ESFFLSPADF TSRDNYEVCL LQKLREHGVE IIALAGYMRL VGKVLLQEYK GKIINIHPAL
LPSFPGLNAQ SQALNYGVRF SGCTVHIVDE GMDTGPILMQ AVVPVYQDDD EDSLAARILV
EEHQIYWRSL QLLAEGRVFL DGRRVVIADK QGG