| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_1628 |
|---|
| Symbol | |
|---|
| ID | 4282547 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008346 |
|---|
| Strand | - |
|---|
| Start bp | 1854023 |
|---|
| End bp | 1854640 |
|---|
| Gene Length | 618 bp |
|---|
| Protein Length | 205 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 638138505 |
|---|
| Product | L(+)-tartrate dehydratase subunit beta |
|---|
| Protein accession | YP_754298 |
|---|
| Protein GI | 114567144 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain |
|---|
| TIGRFAM ID | [TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAGTA AGATATTAAC GACACCGATT CAGAATGAAG AGTTGGAATC ACTGTCGATT
GGCGATATTT TTTATTTGAA TGGATATCTG ATTAGCAGCC GGGATGATGT GCATCAACGA
TTGATCAAAC AGCATAAGAA ACTACCAATC GATCTGGCCG GCAAAGCTAT TTTTCACGCC
GGGCCGATTA TGCAAGAAAT AGAAGGACAG CCGGGGAAAT ATCGGGTAAT CTCCATTGGG
CCGACCACCA GCATGCGTAT GGAGAAATAC GAAAAAGAAT TTATCGCTCA AACCGGTTTG
AAGCTGATTG TGGGCAAAGG TGGCATGGGT CAGAATACGG TGGCTGCTTG CCAGGAACAT
AAGGTTATTC ATGCGGTCTT TCCCGGAGGT TGTGCTGTTC TGGCGGCCAA TTGCGTAGAA
GAGGTTGAAG CTGTGGAATG GTTGGATTTA GGTATGCCGG AAGCAATGTG GGTAATGCGC
GTGAAGAAAT TCGGACCCCT GATCGTTTCC ATCGATACCA GAGGAAATAA CCTTTTTGAG
GAGAATAAGA AGGCCTTCAA CCTTAAGAAG GAAGCCATTG TTGAGGAAAT CTGCTCACAT
GTCGATTACC TGGAATAG
|
|---|
| Protein sequence | MSSKILTTPI QNEELESLSI GDIFYLNGYL ISSRDDVHQR LIKQHKKLPI DLAGKAIFHA
GPIMQEIEGQ PGKYRVISIG PTTSMRMEKY EKEFIAQTGL KLIVGKGGMG QNTVAACQEH
KVIHAVFPGG CAVLAANCVE EVEAVEWLDL GMPEAMWVMR VKKFGPLIVS IDTRGNNLFE
ENKKAFNLKK EAIVEEICSH VDYLE
|
|---|
| |