Gene Swol_1602 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1602 
Symbol 
ID4283697 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp1827910 
End bp1828515 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content46% 
IMG OID638138481 
Productmetal dependent phosphohydrolase 
Protein accessionYP_754274 
Protein GI114567120 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1713] Predicted HD superfamily hydrolase involved in NAD metabolism 
TIGRFAM ID[TIGR00277] uncharacterized domain HDIG
[TIGR00488] putative HD superfamily hydrolase of NAD metabolism 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000171487 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGCAGGG ATTATACCGG GGGGATAAAT ATCTTGAGAG ATAGACAGCA ACTTATCGAT 
ATTATAAAGC AAAGGCTATC ACCCAATCGC TGGCAGCATT CGCTGCAAGT AGCAGAAACT
GCGCTACAGA TGGCTGGACA GTATGAACTA GAATTGGAAC AGGTATATCT GACGGCCTTA
TTGCATGACT ATGCCAAGGG CTTATCGGGT CAGGAACTAT TGCGGCTGGC GGAGGAGAAT
AATCTGATTG AGGATGAAGT TGACCGCGAA GTTCCGGATC TTCTGCATGC ACCGGTAGGG
GCTTTTCTGG TGAAAAGGGA TTTGGGTATG AAAGATGAGG AGGTACTAAT AGCCATCAGC
CGGCATACTC TAGGTTCTAC AAAGATGAGT GAGTTGGACA AGATTATCTA TTTGGCCGAT
ATGATTGAGC CGGGACGGGA CTTTCCTGGC CTGGAGAGGC TAAAATGCCT TAGCTTCCGT
GACCTTGACG AAGCTATGTT GTTTGGGCTA GAATCAACAA TAAAATATTG TCTGGATCGG
GGGCGGATTT TACATCCCCG TACCATTGAG GCCAGAAATT ATTTTTTAAA AATAATCAAG
CGCTGA
 
Protein sequence
MSRDYTGGIN ILRDRQQLID IIKQRLSPNR WQHSLQVAET ALQMAGQYEL ELEQVYLTAL 
LHDYAKGLSG QELLRLAEEN NLIEDEVDRE VPDLLHAPVG AFLVKRDLGM KDEEVLIAIS
RHTLGSTKMS ELDKIIYLAD MIEPGRDFPG LERLKCLSFR DLDEAMLFGL ESTIKYCLDR
GRILHPRTIE ARNYFLKIIK R