Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_1575 |
Symbol | |
ID | 4282179 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | - |
Start bp | 1793882 |
End bp | 1794628 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638138455 |
Product | hypothetical protein |
Protein accession | YP_754249 |
Protein GI | 114567095 |
COG category | [S] Function unknown |
COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0110049 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCCTCGTT TTTTTGTTTC TGCTGATAAT ATCAAGGGTA ATAGCGTTTT GATTGATGAG GAGCAAACCC GGCATATAGA AAAGGTCTTG CGTCTCAAGT CTGGTGATAT AGTCAAGGTT TTTGATGGAA ACGGGAATGA ATACCAGGTG CGCTTGCAGG AAAAAAAGCA GAAGATCTTG CAGGCTGAGA TACTTGCCCA GGAGACAACA GCGGAGGACC TGGCCATTAA TCTTACTCTG GTTCAAGGTA TAGCCCGGAG CGAGAAGATG GATTTTATTA TTCAGAAAGC GGTAGAACTG GGAGTAAGAA GCCTTATTCC CTTGCAAAGT GAGCATAGTG TGGCCCGCTT CGATAAGGAG AAAGAAGGGA AGAAGATAAA ACGCTGGCAG AAGATTGCGC AGGAAGCCTG CAAGCAATGT GGCCGCAACC ATATTCCAGA AGTTAAGCCT ATCTTGGATT TTCCCGCTCT TATGGCTCAA ATAGGGGATA AACCGGCCCT GCTCTGCTAT GAACAGGAGC GGGAAGCCTA TTTTCGTACG CTATTAAGGG AGCAGCGGGA AAATTTTTGC ACCCAGGGTC TTTTTCTCAT TATAGGGCCG GAAGGGGGCT TTTCCCCGGC AGAAGTCGAA ATAGCCAGAA GACAGGGTTG GTTTATAGCA GGCCTGGGCC CCAGGACCTT GCGAACGGAA ACCGCCAGCC TGCTCGCCTG CGGCATCATT ATGTACGAAT ATGGTGAACT CGGCTGA
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Protein sequence | MPRFFVSADN IKGNSVLIDE EQTRHIEKVL RLKSGDIVKV FDGNGNEYQV RLQEKKQKIL QAEILAQETT AEDLAINLTL VQGIARSEKM DFIIQKAVEL GVRSLIPLQS EHSVARFDKE KEGKKIKRWQ KIAQEACKQC GRNHIPEVKP ILDFPALMAQ IGDKPALLCY EQEREAYFRT LLREQRENFC TQGLFLIIGP EGGFSPAEVE IARRQGWFIA GLGPRTLRTE TASLLACGII MYEYGELG
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