Gene Swol_1575 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1575 
Symbol 
ID4282179 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp1793882 
End bp1794628 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content48% 
IMG OID638138455 
Producthypothetical protein 
Protein accessionYP_754249 
Protein GI114567095 
COG category[S] Function unknown 
COG ID[COG1385] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00046] RNA methyltransferase, RsmE family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0110049 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCCTCGTT TTTTTGTTTC TGCTGATAAT ATCAAGGGTA ATAGCGTTTT GATTGATGAG 
GAGCAAACCC GGCATATAGA AAAGGTCTTG CGTCTCAAGT CTGGTGATAT AGTCAAGGTT
TTTGATGGAA ACGGGAATGA ATACCAGGTG CGCTTGCAGG AAAAAAAGCA GAAGATCTTG
CAGGCTGAGA TACTTGCCCA GGAGACAACA GCGGAGGACC TGGCCATTAA TCTTACTCTG
GTTCAAGGTA TAGCCCGGAG CGAGAAGATG GATTTTATTA TTCAGAAAGC GGTAGAACTG
GGAGTAAGAA GCCTTATTCC CTTGCAAAGT GAGCATAGTG TGGCCCGCTT CGATAAGGAG
AAAGAAGGGA AGAAGATAAA ACGCTGGCAG AAGATTGCGC AGGAAGCCTG CAAGCAATGT
GGCCGCAACC ATATTCCAGA AGTTAAGCCT ATCTTGGATT TTCCCGCTCT TATGGCTCAA
ATAGGGGATA AACCGGCCCT GCTCTGCTAT GAACAGGAGC GGGAAGCCTA TTTTCGTACG
CTATTAAGGG AGCAGCGGGA AAATTTTTGC ACCCAGGGTC TTTTTCTCAT TATAGGGCCG
GAAGGGGGCT TTTCCCCGGC AGAAGTCGAA ATAGCCAGAA GACAGGGTTG GTTTATAGCA
GGCCTGGGCC CCAGGACCTT GCGAACGGAA ACCGCCAGCC TGCTCGCCTG CGGCATCATT
ATGTACGAAT ATGGTGAACT CGGCTGA
 
Protein sequence
MPRFFVSADN IKGNSVLIDE EQTRHIEKVL RLKSGDIVKV FDGNGNEYQV RLQEKKQKIL 
QAEILAQETT AEDLAINLTL VQGIARSEKM DFIIQKAVEL GVRSLIPLQS EHSVARFDKE
KEGKKIKRWQ KIAQEACKQC GRNHIPEVKP ILDFPALMAQ IGDKPALLCY EQEREAYFRT
LLREQRENFC TQGLFLIIGP EGGFSPAEVE IARRQGWFIA GLGPRTLRTE TASLLACGII
MYEYGELG